Xiphophorus maculatus (southern platyfish): 102230406
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Entry
102230406 CDS
T02923
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102230406
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
L1 family
102230406
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
Ig_5
V-set
C2-set_2
Ig_4
Ig_6
C2-set_3
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
102230406
NCBI-ProteinID:
XP_014327666
Ensembl:
ENSXMAG00000011144
UniProt:
M4A9Q9
LinkDB
All DBs
Position
1:complement(12040519..12123726)
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AA seq
1171 aa
AA seq
DB search
MRRPGDLLLVLLWTFTSRARSLNIPFEVEQPPTITNHTAGPIIALPFDNTLTIRCEARGN
PPPAYTWTKDGQELNLPNIPTVKTDNRNGTFMFHNKHFAQFRGKYRCFASNKLGTAMTEE
IEIVLSTSPKFPKETFDTIVVKEGYPITLHCNPPEGVAPRQIYWMTHGLQHIKQDERVSM
GTDGNLYFAYALPQDSRKDYGCVAAFQRIRTIVQKTPLSVKVERLEPENNSSESVSATLP
VRAPSLLLPSGVQTEKLLLKGQDLHLECIPAGYPTPKITWMKMGETLTDRTKLDNFKKLL
TISAVDEKDQGKYMCMAENSAGKADHYFDVIVEEPPSWRTKPPQNQLSVIGSDVFIKCSV
DGKPTPVITWRKNGKILQDDRENNRRVLDETVMLHKAGPEDSGVYQCEASNPHGSVLANI
NVLVMNMAPLMLTKDFQEYAVIEGEDIVMNCSVFSSPPSSVSWTKEGTVVEGERFHVLEN
GQFLKIIRSEKGDMGIYACMASNREGMSNLTALLDVKDPTKIVAPPQDVQISSGKLARLM
CRSEYDRSLQGTFEVIWRKDGEEIFRSSENSFRYNMEGDQLQIRDLNISDQGMYTCIART
SLDEDTATAFLTVLDTPDAPMSLKISDQESRNVTLSWIPGSDHNSSVREFVVEYEESHWE
PGRWKELQKVTGNQATAELFLHGDLNYQFRVYAVNAIGPGPPSEPTERLKTPPAAPDRNP
ENIRIHGHFPHEMDISWDPLLPIEFNGPGLEYKISYRKLEVEDKWQEHLVTRPSFIVRNT
STFAPYEIKIQSRNSLGWGPEPRPITGYSGEDIVFWHCLQENVSVPTAAPHNVAVEVINT
TVLRVSWSPVLPATVRGHFGGYNVNWERMKSFLSPDKILEEHKSKSFPGNRTHVIVPGFE
PFSEYRLTVNVFNKKGKGPKSDPVNFYTPEGVPEKVPVLFPRIQDDDTVLLEWGPPSVTN
GILTGYFLKYHLLNKTSLEVIDSFELNLTLPDVTQHQIVRSDRGNLFRFYLSACTRAGCG
PAELAENHSPPAEKVGTEASTSTQRWLIGTLCAVALLTLLAVIVCFVMKTKGGKYAVKEK
EDLFPDAESQAMNDDAYEYSGSDEKRLKKPILGSTDDTIEDRISRDSLADYSDGDGEFSE
DGSFIGEYAGARYRDSISEPSGPSGPSTTTA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggccaggcgacctgctacttgttctgctttggacctttacatccagagccaga
agccttaatattcctttcgaagtggagcaacctccaactataaccaaccatacagcaggt
cccattattgcacttccttttgacaatacactgactataagatgtgaagccaggggtaac
ccaccaccagcatacacatggacaaaggatggccaggagctaaaccttccaaacatccca
acagtcaaaacagacaacagaaatgggacattcatgtttcacaacaagcactttgcccag
ttcaggggtaaatacagatgctttgcttccaataagctgggaactgccatgacggaggag
attgaaatcgtactttccacttcacccaagttcccaaaggaaacatttgataccattgtc
gttaaggagggctatccaattactcttcactgtaaccctccagaaggtgtggccccacgt
cagatctattggatgactcacggtctgcagcacataaagcaggatgagagggtctccatg
ggaaccgatggcaacctgtactttgcttatgccttaccacaagacagtcgcaaggattac
ggctgtgtcgctgccttccaaaggatacgtactattgtccagaaaacccccttgtccgtc
aaggtggagagattggaaccggagaacaactcttctgagagtgtcagtgccacgctacca
gttcgagcacccagcctactgctgccctctggtgtccaaacagagaagctgttgctgaaa
ggacaggatctgcatcttgagtgtataccagccggatatcccactcctaaaataacatgg
atgaaaatgggagaaactctaactgatcggacaaaactggataactttaagaagttgttg
accatcagtgctgtggatgagaaggatcagggaaaatacatgtgtatggctgaaaattca
gccggaaaggcagaccattactttgatgtgattgtagaagagccaccatcatggcgtaca
aagcctccccagaaccagctgtctgtgatcgggtcagacgttttcattaagtgctcagtg
gatggaaaaccaaccccagtgataacgtggagaaaaaatggaaaaatactccaagatgac
agagagaacaacagacgagtgcttgatgaaactgtgatgcttcacaaggctgggccagag
gacagtggcgtctaccagtgcgaggcctccaatcctcatggcagtgttcttgccaacatt
aatgtcttagtcatgaatatggcacctcttatgctgacaaaggacttccaagagtatgca
gtgatagaaggagaggacattgtcatgaactgcagtgttttcagctctcctccatccagt
gtctcttggaccaaggaggggacagttgttgaaggagaacgatttcatgttttagaaaat
gggcaattcttgaaaatcatccgttcagaaaaaggtgacatggggatatatgcttgcatg
gctagtaacagagaaggcatgtcaaatctcacagctctgctggatgtgaaagacccaaca
aaaattgtggctcctcctcaggatgtgcagatcagcagtgggaagttggcccgattgatg
tgccggtcagaatatgacagaagtctgcagggcacctttgaggtgatctggaggaaggat
ggggaggagatctttcgctcttctgagaatagtttcaggtacaatatggaaggtgaccag
ttgcagattagggacttgaatatcagtgatcaggggatgtatacatgcattgctcgaaca
agtcttgatgaggataccgcaactgcctttctaactgtactggatactcctgatgctcct
atgagtttaaagatatcagatcaggaatcaagaaatgtaactctgtcctggataccaggg
agtgatcacaacagctccgtgagagaattcgtggtggagtatgaggagagccactgggag
cctggaaggtggaaggagctgcagaaagtcaccggtaaccaggcaacggctgagctcttt
cttcatggagaccttaactatcagttcagagtttatgctgttaatgccattggacctgga
ccacctagtgagcccacggagagactcaaaacaccccctgctgcaccagacagaaacccg
gaaaacatcagaattcatggccactttccccatgaaatggacatcagctgggacccactg
ttacctattgaattcaatggtccaggacttgagtataagatctcctacagaaaactggag
gtggaagataaatggcaggagcacctggtcacaagaccctcctttatcgtcaggaacaca
tccacctttgcaccgtacgagatcaaaatccagagcaggaacagcctcggctggggtcca
gaaccaagacccataaccggttactctggagaagatattgtcttttggcactgtctccag
gaaaatgtgtcagttccgactgcagcaccacacaatgtagcagtggaggtgatcaacacc
accgttctcagagtcagctggagcccagttctcccagccacagtgcgaggtcattttgga
ggctacaatgttaactgggagagaatgaaaagcttcctgagtcctgacaagattttagag
gagcataagtccaagtctttccctggaaacaggactcatgtcattgtgccaggatttgaa
cctttctctgagtacagactcacagtgaacgtttttaacaagaagggaaaaggaccaaag
agtgatccagtcaacttttatactccagagggggttccagagaaagtgcccgtgctgttt
cccaggattcaggatgatgacactgttctgctggaatggggaccaccgtcagtgacgaat
ggcatcctcactggttattttctaaagtatcacctcttaaataagacttcgctggaggtg
attgattcctttgagctgaacctcactttgcctgacgtcactcaacaccagattgtgaga
tcggacaggggcaatctcttccgcttctacctcagtgcgtgcactcgagcaggttgtggg
cctgcagaactggctgaaaatcacagtcctccagcagaaaaagttggaacggaagccagc
acttcaactcagcgctggctcatcgggactctgtgtgcggtggcattactcacgcttctg
gcagtgatcgtgtgctttgtgatgaaaaccaagggtggcaaatatgcagtaaaagagaag
gaagatctctttcctgatgcggagtcacaggcaatgaatgacgacgcctatgaatacagt
ggcagcgacgaaaaacgactgaagaaacctatcttgggttccacagacgacacgattgag
gacagaatcagcagagatagtttggccgattactccgatggagacggagaattcagcgag
gatggctcatttatcggagaatatgccggagccaggtaccgggattccatcagtgagccc
agcggacccagcggacccagcactaccacggcgtaa
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