Xiphophorus maculatus (southern platyfish): 102230440
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Entry
102230440 CDS
T02923
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04261
Adrenergic signaling in cardiomyocytes
xma04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102230440
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
102230440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102230440
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102230440
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
SurA_N_2
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
102230440
NCBI-ProteinID:
XP_023182581
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Position
21:24982563..25098879
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AA seq
1296 aa
AA seq
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MAGYVFPMGPESFKRFTPDSLAAIEQRMAQEEARRKKQYQEDLGDVELPRPRPDLEAGKQ
LPRIFADIPSHLVGVPLEDIDPYYFRDKRTFIVLNKGKAIFRFSATSALYMFSPFHPIRR
LAIRILVHSLFSLFIMCTILTNCCFMAMSEPANWAKYLEYTFTGIYTFESLIKILARGFC
VGPFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVRSTEHCINGSLPANTSFFCNN
KTWASIKDFIEDEDNFYKVEGAKDALICGNSSDAGKCPDGFDCLKTGRNPNYGYTSFDTF
GWAFLSLFRLMTQDYWENLYHHTLRSAGKTYMVFFVVVIFLGSFYLINLILAVVAMAYEE
QNQATIAEACQKEREFQQAMERLKKEQQMAAQKPPDSDSLTSPDLSPLGPPLDSSEERRR
SQALMGVADGEGNLSEEKLLQVDLMDGGKALHPLLARSFSTRTRRSSQVSSIFNFRLRSR
GSEGEMADDEFSVPGDVVDGVGGRTYSGGTFSGILTNPWPKRRLSTYSTASRNSQVFYPT
LNVNGKLFVSMDQNGVSPPPLQGQLPTCTMEKVKEESVPTSTTELSTMLLPRPSSTQGSE
RRGRAMSAASYLTDVMEELEESHKKCHPCWYVFAHRYLVWECSPSWLRLKQLVKIMVMDP
FLDLAITVCIVLNTLFMAMEHYPMTDEFNGMLSIGNLVFSGIFTAEMVLKIIALDPYYYF
QTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARSWPTLNTLIKIIGNSMG
ALGNLTLVLAIIVFIFAVVGMQLFGKNYQECVCKISKDCVLPRWHMKDFFHSFLIVFRVL
CGEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVLLNLFLALLLSSFSSDNLSAPDEDGE
MNNLQIAIHRITLGLGWCRRQVADFFNGNLKRRRQKRKEAKAMMKLKRLSTVHTEANGAV
IGRHVEKYVVPEDDSYMTNPNLTISVPIAPGESDVEFPEEEEEEEEEEGQEEQSEGSEGD
EEREEEQKEEISLSEGSTVDLRKPGEEEDEYSELAEEAMDPDNCFPDVCVSRFQCCDIDT
TAGLGQMWWRTRKTCYQIVEHSWFESFIIFMILLSSGALAFEDIYIEQRRVVKVVLEYAD
KIFTYIFILEMMLKWLAYGFKKYFTNYWCWLDFLIVDVRHPPAWRFCRSGLTRFAFRPDR
SHFDTLSAALRNSCGGAALIRQPVNPGCKEATAVPQ
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggctggctatgtgtttccaatgggaccagagagctttaagcgcttcacgccggactcc
ctggcggccatcgaacagcgcatggcccaggaggaggcccgacgcaaaaagcagtaccag
gaggacctgggcgatgtggagctgccccggccccggcccgacctggaggcggggaagcag
ctgccccggatctttgccgacatcccgtctcacctggtgggcgtccccctggaggacatc
gacccctactacttcagagacaagaggactttcatagtgctgaacaaagggaaggccatc
ttccgcttcagcgccacgtcggcgctctacatgttcagcccgttccaccccatccgccgg
ctcgccatccggatcctggtccattctttgttcagtttgttcatcatgtgcaccatcctg
accaactgctgcttcatggccatgtcggagccggccaactgggccaagtacctggagtac
accttcacaggtatttacaccttcgagtcgctcatcaagatcctggccagaggcttctgc
gtgggccccttcaccttcctgagggacccctggaactggctggacttcagcgtcatcgtg
atggcatatgtcactgagtttgtggacctgggtaatgtgtcagccttaaggacgttcagg
gtgctgcgcgcgctcaaaaccatctcagtcatcccaggcctgaagacgatcgtcggcgct
ctgatccagtcggtgaagaaactcgctgacgtcatgatcctcaccgttttctgcctgagc
gtcttcgccctcatcggcctgcagctgttcatgggaaacctgcgacagaaatgcgtccgc
agcacggagcactgcatcaacggcagcctgccggccaacacctccttcttctgcaataac
aagacctgggcctccatcaaggacttcatcgaagacgaagataatttctacaaagtggaa
ggagccaaggatgccttaatctgtggaaacagcagcgacgcagggaagtgtcccgatggg
ttcgactgcctgaagacgggcagaaacccaaactacggctacaccagcttcgacacgttc
ggctgggccttcctgtcgctgttccggctgatgacccaggattactgggagaacctctac
caccacacgctgcggtcggccgggaagacctacatggtgttcttcgtggtggtcatcttc
ctgggctccttctacctgatcaacctgatcctggccgtggtcgccatggcgtacgaggag
cagaaccaggccaccatcgccgaggcgtgtcagaaggagcgcgagttccagcaggccatg
gagagactgaagaaagagcagcagatggcggcgcagaaaccgccggactccgactccctg
acctcaccagacctctcacctcttggcccgccattggatagctctgaggagcggaggcgg
agccaggcgctgatgggtgtggccgacggggaggggaacctgtcggaggagaagctgctg
caggtggacttgatggacgggggaaaggccctccatcctctcctcgctcgctccttctcc
acgcggacgcgacgaagcagtcaggtgtcgtccatctttaacttccggctgaggagccga
gggtcggaaggcgagatggcggacgatgagttcagcgttcccggcgacgtggtggatggc
gtcggtggcaggacgtacagcggcgggacgttcagcggcatcctgaccaacccctggccc
aaacgcagactcagcacctacagcacggccagcaggaactcccaggtgttttatcccacc
ctgaacgtcaacgggaagctgttcgtctccatggaccagaacggggtctccccgccgccg
ctgcaggggcagctgcctacctgcaccatggagaaggtcaaggaggagagcgtcccgacg
tccaccacggagctcagcaccatgctgctgcctcgaccttcgtccacgcaggggtcagag
cggagggggagggctatgagtgccgccagctacctgaccgacgtcatggaggaactggag
gagtcccataagaagtgccacccctgctggtacgtgttcgcccaccgatacctggtgtgg
gagtgctccccctcctggctgcggctgaaacagctggtgaagatcatggtgatggatccc
ttcctggacctggccatcaccgtctgcatcgtcctcaacacgctcttcatggccatggag
cattacccaatgacggacgagttcaacggcatgctgagcatcggaaacctggttttctcg
gggatcttcacagcggagatggttctgaagatcatcgccttggacccgtactactacttc
cagacgggctggaacatcttcgacagcatcatcgtgtgcctcagcctcatggagctcgga
ttgtctgatgtggaggggctcagcgtcctgcgctccttccggctgctgcgtgtttttaag
ctggcccgctcctggccgaccctcaacacgctcatcaagatcatcgggaactccatgggc
gccctgggcaacctgacgctggtcctcgccatcatcgtcttcatcttcgccgtggtgggg
atgcagctgttcgggaagaactaccaggagtgtgtgtgtaagatctccaaggactgcgtc
ctcccccgctggcacatgaaggacttcttccactccttcctcatcgtgttccgggttctg
tgcggcgagtggatcgagaccatgtgggactgcatggaggtggcggggcagccgctctgc
atcctcgtcttcatgctggtcatggttatcggaaacctggtgctgctgaacctcttcctg
gctctgctcctcagcagcttcagctccgacaacctctctgccccagatgaagacggggag
atgaacaacctccagatcgccatccaccggatcactctgggcctgggctggtgccgccga
caggtggcggacttcttcaacgggaacctgaagcggcggcggcagaaacgaaaagaggcc
aaagccatgatgaagctgaaacggctgagcaccgttcacactgaggccaacggcgccgtc
atcggccgccatgtggagaagtatgtggttccggaggacgacagctacatgaccaacccc
aacctgaccatcagcgttcccatcgcccccggagaatccgacgtggagtttccggaggaa
gaggaggaggaggaagaggaggaaggtcaggaggagcagagcgaggggtccgagggagac
gaggagagagaggaggagcagaaagaagaaatcagcctatcagagggcagcacagtggac
ctgaggaagcctggcgaggaagaggacgagtactcagagctggccgaagaggccatggac
ccggacaactgcttccctgacgtgtgcgtgtcccggttccagtgctgcgacatcgacacc
acggcgggtctgggccagatgtggtggagaacgaggaagacctgctaccagatcgtagag
cacagctggttcgagtccttcatcatcttcatgatccttctcagctcgggagctctggcc
ttcgaggacatctacatcgagcagagaagggtcgtcaaggtggtgctcgaatatgctgac
aagatcttcacctacatcttcatcttagagatgatgctcaaatggctcgcctacggcttc
aagaagtacttcaccaactactggtgctggctggacttcctcatcgtcgatgtaagacat
ccgcccgcctggaggttttgtaggtccggtttgacccggttcgccttccggccggacagg
agccacttcgacactttgagcgccgccctgaggaactcctgcggcggtgcagcactgata
cgacagccggtgaaccctgggtgtaaagaggcgacagccgtgcctcagtga
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