Xiphophorus maculatus (southern platyfish): 102230456
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Entry
102230456 CDS
T02923
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102230456
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102230456
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102230456
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
102230456
NCBI-ProteinID:
XP_023198250
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Position
11:25087294..25095455
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AA seq
791 aa
AA seq
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MFHSRLPXFYVKMRKSELFDFHLEADDRTEEEKRKQKAPKKDGLASALGWSKEPPKAPMD
TDYQEEMEPVKPQIRFNLNFDKEIRGEASQPKRDSSTFTIERLFEAVASRDVNKLDGLYQ
YLNQNMKKLSDSLYQSYGKTALMKALLHLKDGKNETIEELVDVSERIGDIKEFVNAAFTD
SYYKGQTALHIAIERRSVSYVKLLVSKGADVHAKACGKFFQPHDGPNFYFGELPLSLAAC
TNQPDIVSYLMENEFPADAKMADSHGNTVLHALVLVADNSKENTEFVTAIYDRILKTNAR
LHPKIKLEEKENNDGLTPLKLAAKNGKIGVFSHILQREFQVNHFKHLSRKFTEWAYGPVH
SSLYDLTSVDSYENNSVLEILIYGSEIPNRHEMLEKEPLSCLLEDKWKKFGCGMFFFNFL
VYLVYLIIFTVVAYNKKDATQLPFIPDDAWDYLYVSGQLLTLLANCYFFVTGIIEMKRKR
PKMQTLLIDGYYEILFFAQGLLFLVATVLYWAGRQEYLGFLVICLALSWVNVLYYSRGDK
HMGIYSVMIQKMILSDILRFLFVYIVFLFGFSAAVVTLLIQPPPENRTGKGRQGFFATSK
PDTECFTPSYRNISYTTLQLFKFTIGMGDMEFTQEYQYMEVFYVLLIGYIILTYILLLNM
LIALMSRTVEKITTESASIWRLQRAVTIMDMERRLPCCLKKSFRSGVERKLCTAIGDDRR
RCFRVEEMNWNKWNTNLVNISEDPGCCDLSQQPDLDSPSRGFNRGRSWRDIFMEGSWRRR
RPPQSTEMSLL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattccagattaccanngttttatgtaaagatgagaaaatcagagctttttgat
ttccatctggaggcagatgacagaacggaggaggagaaacggaagcaaaaggcaccaaag
aaggatggcttggcttctgctttagggtggagcaaggagccccctaaggcccccatggac
accgactaccaggaggaaatggagccggtcaagcctcaaatccgattcaatctcaacttt
gacaaagagattcgaggtgaggcatcacagccaaagagagacagctccactttcaccatt
gagcgtctgtttgaagcagtggccagcagggacgtcaacaaactggacggcctataccag
tacttgaatcagaacatgaaaaaactctctgactctctgtatcagtcgtacggtaaaacc
gccctgatgaaagctctgctgcacctcaaagatggcaagaacgaaaccatagaggagctg
gtcgacgtttcagagaggatcggcgacataaaagagtttgtgaacgccgccttcaccgat
agctactataaaggtcaaactgctctacatatagccattgagaggaggagtgtgtcctat
gtaaagctgctggtcagcaaaggtgcagatgttcatgccaaagcctgtgggaagtttttt
cagcctcatgatggtcccaacttctactttggtgagctgcccctgtctctagcagcctgc
acaaaccagcctgacatagtgagctacttaatggagaatgagtttccagcggacgccaag
atggcagactctcacggcaacacagtgctgcacgccctggtgttggtggccgataactcg
aaggagaacacagaattcgtaacggccatttatgatcgcatcctaaagaccaatgcccga
ctgcatcccaagataaagctggaggagaaagagaacaacgatggactcacacctctcaaa
ctggctgccaagaatggcaagattggggtattttctcacatcctacaaagggaattccag
gtgaatcacttcaagcacttgtcccgtaaattcactgagtgggcttatggacccgtccac
agttctctgtatgacctgacctctgtggactcatacgagaacaactctgttctggaaatt
ctaatctatggcagtgaaattcccaaccgccacgagatgctggagaaggagccgctcagc
tgcctcctggaggataagtggaagaagtttggatgtggaatgttttttttcaacttcctg
gtctaccttgtgtacctgatcatcttcactgttgtagcctacaataaaaaagatgctaca
cagcttccgtttatccctgacgacgcctgggattacctgtatgtttcaggccagctgctg
actttactagcaaactgctatttctttgtcacagggattatagaaatgaagaggaagagg
ccaaagatgcagacactgctgattgatggatattatgagattctcttcttcgcgcagggc
ttactgttcctggtcgccactgttctgtactgggcggggaggcaggagtacctgggcttc
ctggtgatctgtctggctctcagctgggtgaacgtgctgtactactccaggggcgacaaa
cacatgggcatctacagtgtcatgatacagaagatgatcctcagcgatatcctgcgcttc
ctttttgtttatattgttttcctctttggattctcagcagccgtcgtcacactgctcata
caacctcctcctgaaaacagaacaggaaaagggaggcaaggattttttgctacctccaaa
cccgacacagagtgtttcacgcccagctacagaaacatctcctacactaccctgcagctc
ttcaagttcaccatcggcatgggcgacatggagttcacccaggagtaccagtacatggag
gtcttctacgtcctcctcatcggctacatcattctcacctacatcttgctcctcaacatg
cttatagccctaatgagccgcacagtggaaaagatcaccacggagagcgccagcatttgg
aggctgcagagggctgtcacaatcatggacatggagaggcggctaccctgctgtctgaag
aagagttttcgctctggggtggagaggaaactctgtacagctattggagacgatcgtcgg
aggtgtttcagggtcgaggaaatgaactggaacaaatggaacaccaacctggtcaacatc
agtgaggatccaggatgctgtgatctgagccagcagcctgatttggacagcccttccaga
gggtttaacagagggaggagctggagagacattttcatggagggttcttggaggaggagg
aggccgcctcagtccaccgagatgagcctcctgtaa
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