Xiphophorus maculatus (southern platyfish): 102230558
Help
Entry
102230558 CDS
T02923
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102230558 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102230558 (dcp1b)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102230558 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
102230558 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
102230558
NCBI-ProteinID:
XP_014326836
Ensembl:
ENSXMAG00000011153
UniProt:
M4A9N9
LinkDB
All DBs
Position
17:complement(4170199..4183580)
Genome browser
AA seq
630 aa
AA seq
DB search
MSSAASNSCLAAKGLDISLSALQRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEGTL
FIYTRLASPRHGFTIMNRLNMENLTEPITKDLDFQLQDPFLLYRNARLFIHGIWFYDKQD
CQRIAQRMRILTQQEQILAQSQGGSLSPRAAAAGGGVLVGGNNEAKAVDIIQMLTKARTE
YDKSTSEPKEIGGSSVLCGNPNLIKPIPVKPNTQVNEGADTTVVTLTTLLGSQHQHHHPL
KSDPVPPLAASTAAGKVARPPVARTLTYEDSLNSGRNVATSGGGDPAVGPADREESGNAL
RQLPNQLQHCPAIAKLMQGQRGAAAAGGVLQTLSESPENRLCDNGVPLEHHHHHHPLHHQ
HQHPHLHHHHQEQQHDPIKRLLQNHPPPLLATSFTAAAPLVLQQNPYPASQPGQLDSVSR
SHLEAQQGQQLLLGLTKLQAEIQKRGPTDSAAMGTGLSSQMQGVVSPHELLQKLQLVQQE
QSLTSHEHPRLHPHPGLAPRFLGPSASQSQRSSLGTGPTQTSVAPDQKAELQFQIISPQR
IPATVAPILLLSPSVFTQTKSSSRLPVAAPESSSVPSTLCKPSLQEEARALSRSQLQAAL
LHLIQTDSSFLDSIYKAYVSRFANSSGSKY
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcagctagcaatagctgccttgctgctaaagggctggacataagtctgtct
gccctgcagagacaagacccttacataaacaacattgtggacgtggccagccaagtagcc
ctgtatacttataataaccgagcaaatgagtgggagaagacagaagtggagggcactttg
tttatttacacaagattggcatctcctaggcatggcttcacaataatgaaccgtcttaat
atggagaatctgacagagcccatcacaaaagacttggacttccagctgcaggaccctttc
cttctttaccgtaatgcacgactttttattcatgggatctggttctacgataagcaggac
tgtcagcgaattgcacaaaggatgaggattctgacccagcaggagcagatcctcgctcag
tctcagggtggttccttatcccctagagcagcagcagcaggaggaggtgtcttagtcgga
ggaaataacgaggctaaagcggtcgacatcattcagatgttgaccaaggcacgaacagag
tatgataagtctacctcagagccaaaggagattgggggcagcagtgtactgtgtggaaat
cctaatctgatcaaaccaataccagttaaaccaaacactcaggtcaatgaaggagcagac
accacggttgtgaccttaaccaccctgttaggctctcagcatcagcaccaccaccctctt
aaatctgacccagttcctcctctggctgcttccacggcagcaggaaaggtcgcccgccca
cctgtcgcccgcacactgacctatgaggattcactaaactctggcagaaacgtcgccacc
tccggaggtggagacccagcagttgggccggcggacagggaagagagcgggaacgctctc
cgccaactgccaaaccaacttcagcactgtccagccattgcaaagctcatgcagggacag
aggggggcggcagcagctgggggcgtgcttcagacactgtccgagtccccagagaaccgg
ctgtgtgacaacggggtgccgctagaacaccaccaccaccatcatcccctccatcaccaa
catcagcacccccacctccatcaccaccaccaggagcagcagcacgacccaataaagcgc
ctcctgcaaaaccatccaccccctctactcgccacttctttcactgctgcggctcctctg
gtgctgcagcagaacccttatcccgcctctcagcctggccaactggattctgtgtcacgt
tcccacctcgaagcacaacaaggtcagcagctcctcctcggcctgacgaagttacaggca
gagatacagaagagagggccgacggattctgctgccatgggaacaggtttgtcatcccag
atgcagggtgtggtttctcctcatgagctcctgcaaaaactccagctggtccagcaggaa
cagagcttgacttcccacgaacatcctcgactccatccgcatccaggattggcacctcga
ttcctggggcccagtgcgagtcaaagccaacgctcatctttaggcacaggcccaacccag
acttcagttgccccagatcaaaaagctgagctgcagtttcagatcatctccccacagcgg
atacctgccacagtggcccccatcctgctcctctctcccagtgtgttcactcagacgaag
tccagcagcaggctaccagtggctgctccagaaagcagctctgtaccctcaaccttatgc
aaaccttcactgcaggaggaggccagagctctttctagaagccagcttcaagcagcactg
ctgcacctgattcagactgacagctcattcctggactccatctataaagcgtacgtcagc
cgcttcgctaacagctccggcagcaagtactga
DBGET
integrated database retrieval system
