Xiphophorus maculatus (southern platyfish): 102230694
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Entry
102230694 CDS
T02923
Symbol
trim8
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102230694 (trim8)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102230694 (trim8)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102230694 (trim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_10
RING_XB3-XBAT31
RT_RNaseH_2
DUF3287
DUF7357
U-box
TRIM_CC
DUF3584
DUF16
Motif
Other DBs
NCBI-GeneID:
102230694
NCBI-ProteinID:
XP_005794672
Ensembl:
ENSXMAG00000015690
UniProt:
A0A3B5R1N6
LinkDB
All DBs
Position
10:9558549..9573801
Genome browser
AA seq
595 aa
AA seq
DB search
MPACTTMASDMAETWRNCFEEELICPICLHVFSDPIQLPCKHNFCRGCISEAWAKDSSLA
RCPECNHAYTQKPSLEKNHKLSNIVEKYNALSVEKASTPTLQCILCRRGPPLPAVKVCLR
CNAPCCQSHIQTHLQQPCSALGHLLVEAEAIKAWTCPQHDEYRLYHCEAEQTAVCQYCCF
ARCHPSHGHAVTDVELRRNDIRQNLLRQQERVEERVQEIEEQLCKLDSDKCTVEDRVCEL
KEEVRLQYQRMHQLLEEDLGRTLEALDRAQARFFQENAAQILALGEQRHEAQKLLSSIHT
AFSKAEELSFMKNTKPVKILTDRSQACVGSSLPPYKVGNLNSKLFLSEISKREKSLKRTL
EVPLTPPSAFLQTVAAFPSGQSSGSGAEKRKHSTAFPEGNGSTGKNATPGFKDSSSSSSS
SSSSSLAKQPYLGSGSASGEGQSANQQTLGPCAPPHIGEGGGAGSGSGSLTNHHSGSVFG
SSHFPPGGSGSSHSSQQAVLPQYGGRKILVCTMDNCYCSGVPSVSGHRSHPPYPRSGSFP
WVSPQDYPPPPGLASGGPSMQGLAVRDWIDASQTHRHADFYGLYGQPSTKHYVTS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctgcaccaccatggcctctgacatggctgagacgtggaggaactgttttgag
gaggagctcatctgccctatctgcctgcacgtgttctctgatcccatccagctgccctgc
aagcacaacttctgccggggctgcatcagcgaggcctgggccaaagactcctcgctggct
cgctgccccgagtgcaatcatgcctacacgcagaagcccagtctggagaagaaccacaaa
ctgtccaacatagtggagaagtacaacgccctgagcgtggagaaggccagcacgccgacg
ctgcagtgcatcctgtgccgccgaggcccgccgctccctgcggtcaaggtgtgcctgcgc
tgcaatgccccgtgctgccagtcccacatccagacgcacctgcagcagccgtgctcggcc
ctggggcacctgctggtggaggcggaggccatcaaggcctggacctgcccgcagcacgac
gaataccggctgtaccactgcgaggccgagcagacggcggtgtgccagtactgctgcttc
gcccggtgccaccccagccacggccacgccgtcaccgacgtggagctgcggcgcaacgac
atcagacaaaacctgctgagacagcaggagcgcgtggaggagcgagtgcaggagatagaa
gagcagctctgcaaacttgactctgacaagtgtacagtggaggacagagtgtgtgagctg
aaagaggaggtgcgcctgcagtaccagcgcatgcatcagctcctggaggaggacctcggc
cgcacgctggaggccctggaccgggcacaggctcgcttcttccaggagaacgcggcgcag
attctggccctgggggagcagcggcacgaggcccagaagctgctgagctccatccacacg
gccttcagcaaggcggaggagctgagcttcatgaagaacacaaaacccgttaaaatcctc
acagacaggtctcaggcctgcgtgggaagcagcctccctccttacaaagtggggaatctg
aactctaagctgtttctttctgagatctcaaagcgagagaagagcttgaagcgaacgctt
gaggttcctctcaccccgccgtcggcattcctgcagacagtcgccgctttccccagtggc
cagagctccggctccggggcggagaaacggaaacattccaccgccttcccggagggaaac
ggcagcacggggaaaaacgccactccgggtttcaaagactcatcctcatcttcctcctct
tcttcctcttcgtcgttagccaagcagccctacctggggtccggctccgcctccggagag
ggccagtccgccaaccagcagactctgggcccctgtgcgccaccccacatcggtgagggc
ggcggcgccggaagcggtagcggctccctgaccaaccatcactccggctccgtgttcggc
tcctcccacttcccgccggggggcagcggctcctcccactcctcccagcaggccgtgctg
ccgcagtacggcggcaggaagatcctggtctgcaccatggataactgctactgctccgga
gtgccgtcggtgtcaggccaccgcagccaccctccctacccgcgctcgggctccttcccc
tgggtgagcccccaagactacccgccccctcccggcctggcctctggagggccgtccatg
cagggactggcggtgagggactggatagacgcctcacagacgcacagacatgctgatttc
tacgggctgtacgggcaaccgtccaccaagcactacgtcaccagttaa
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integrated database retrieval system
