Xiphophorus maculatus (southern platyfish): 102230764
Help
Entry
102230764 CDS
T02923
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102230764
04020 Calcium signaling pathway
102230764
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102230764
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102230764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
102230764
NCBI-ProteinID:
XP_023204638
Ensembl:
ENSXMAG00000012146
LinkDB
All DBs
Position
16:complement(15282067..15450741)
Genome browser
AA seq
2350 aa
AA seq
DB search
MTSEECPVPLRSISSARPGQSEEYGSAHIDDIIEEVGPGDDNVSIGSDLSTLVLPFPELA
PVVFFCLKQTTCPRNWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQIL
QAFDAFIYIFFALEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLS
AIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLL
RNRCYQEENFTIPSGMTLPAPYYRPEEDDERPFICSLASDNGIMSCSDVPARREGGRVCC
LDKEDALHRQSLGLSPEPLSNGSGAGEALGLCINWNQYYTRCHTGSTNPHKGAINFDNIV
YAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSET
KQREHQLMQEQRAQCLSSSTLASMAEPGDCYEELFQLVCHVLRKAKRRSAALYYTLRGKP
APTSIGRGNRRGGGNVNGDRHHLRHQRSPKCPHHGKQNHDSQAQANSISLTVQSPEECPI
CLKEGSRSAGQENGEENEEDAVKETDKEENHLEEKKNEERRQRRTCFGRCRDLWKDMRRK
LWGIVESKYFSRGIMIAILINTISMGIEHHNQPEELTNVLEICNIVFTSMFTLEMILKLS
AFGFFEYLRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQL
VVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIV
TVFQILTQEDWNMVLYNGMASTSPCAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDAN
RSYSDDDRSSCNFDENDKQKDSLHLSDPKICTLTPNGHLDMSLLPAGLFPGEKLTFALGS
RKNSVISLGRADLERRAAYPGRGYHNWGRPLPPQPHPLWARRSSWSSLGGRPCSSSSPSA
SPAFTPPSARPFYGYGLGGLGGMVGGSLRIRGPRASSSPHHHHHIQPDEEESLLSPPAAA
PHCLQLPHPKLHDYFVPRRDRRALSLELPHMLQSPAGNPQQHHALPPVKLHAHHRKKSLS
GGLVISTGGDLEGIHQDCNGKTPLSHLLLPPSRRQTEQTGGVNLQSHLMTDVFPQVNTRS
KDREDLDDDIEYSLCFRIQKMLEAYRPDWCETREDWSIFLFSPQNKFRQVCQSIIAHKLF
DYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYIFTAIFVGEMTLKVVSMGLYMGE
QAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKL
VVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCLGPDVKNITNKSDCLDKKY
KWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPITNNNPWMLLYFISF
LLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPYYSSYG
NMRLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPRSLDLALKYCNYFFTSTFVLES
ILKLIAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEISAALPINPTIIRIMRVLRIAR
VLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEG
MSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPNHDSGVDYGCNPSLQFISPMY
FVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGAPSCGG
LGVDKGLLTVGSGLGAAPGRRERGGGARGETGEGGRRLRHPVTNQGPYNSCDSPQSYSPA
QESQWLDSVSLLIKDTIDGEMLMIDNLSGSVFHHYSSPPVCKDCKGHPQEQIRMAEIEQA
SLKSEQLSDKSSSPALPDDLSLDEHTSYILLMQDGKGRCSSSSHNSDEADGGGGGHGGGH
QTEEQGQGQGASLQCRASSSDTETETELQEMEMQTYHTKMCSPLCSPGGISSISSKDRGK
GDEEKGASGISTLFHLPAEFFHSAGAAIPVPSRSRSLRLSRGLRLTSPASWVSFRSPGAP
RKMLCAQYPSHSDSSLATGSSEGSLQTTLEEGLSFSVSPSQNLELPIPTASLSPMCPISQ
PEDRITISSPLQALKPRVNPPSSVTLLATRGHQRSQSSGRGSTSPGYNRDDSIDPSDEDL
GIGIGSSIGGCGSSQAGNSEHLSEALSSMSLTSLLPPSTILCPGGQVKKCNSTGSLDKGG
LLLSSRCREGRREIMGMELMDPQGFLANPWTGVLGDSRRGEGTGVIKDAEHSLKGKSSSQ
TTVGSCRKNR
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaggagtgtcctgtgccgctgaggagtatctcctcagcacggccggggcag
agcgaggaatatggctcagcacacatagatgacatcattgaggaagtaggtccgggcgat
gacaacgtcagcatcggcagcgacttaagcacgcttgtgctgcccttccctgagttggcg
cctgtggtcttcttctgcctcaagcagacgacctgtcctcgcaactggtgcattcgcatg
gtctccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtgacg
cttggcatgtaccagccctgcgagaacattgactgcacctcggaccgctgtcagatactc
caggccttcgatgcatttatctacatcttctttgcattggagatggtggtaaagatggtg
gctcttgggatctttggccgtcgctgttacttgggagatacctggaacaggctggatttt
ttcatcgtcatggctgggatggtggagtactccctggacctgcaaaacatcaacttgtct
gccattcgcacggttcgggttcttcggcccctgaaagccatcaacagagtcccaagtatg
cgcattctggtgaacctgctgctagacactctccccatgctgggcaatgtgctgcttctc
tgcttcttcgtcttcttcatcttcggcatcatcggcgtgcagttatgggcgggactcctg
aggaaccgatgctaccaagaggagaacttcaccataccttcaggcatgacgctgccagct
ccttactaccgaccagaagaggatgatgagcggcccttcatctgctccctggcttctgat
aacggcatcatgtcatgctctgatgtaccagcgcggcgggaaggaggacgcgtatgttgt
ctggataaggaagacgctctgcacagacagtctctgggcctgagtcctgagccactgtcg
aatggcagcggcgctggtgaagctctgggtctgtgcatcaactggaaccagtattataca
cggtgccatactggaagcactaacccccacaaaggagcaattaactttgacaacattgtg
tatgcctggattgtcattttccaggtgataacattagagggctgggtggagatcatgtat
tatgtgatggatgctcactccttttacaacttcatctacttcatccttctcatcattatt
ggttcattcttcatgatcaacctgtgcctggtggtcatcgccactcaattctcagagacc
aaacaacgggagcaccagctgatgcaggagcaaagagcgcagtgcctgtcctcttccacc
ttagccagcatggctgaaccaggagactgctatgaagagctcttccagctggtctgtcac
gtccttcgtaaggccaagaggagatcagcagctctctactacactctaagaggcaagcct
gctccaaccagtataggcaggggcaacaggcgagggggagggaatgtcaatggagatcgg
catcatttgaggcaccaaagatcacccaaatgtccacaccatggcaagcagaaccatgac
tcccaagctcaagctaactccatcagcctgactgtccagagccctgaggagtgccctatc
tgtttgaaggaaggttcgaggtctgcaggacaggagaatggggaagaaaatgaagaggat
gccgtgaaggaaacagacaaagaggagaaccacttagaggagaagaaaaatgaggagagg
aggcaaaggaggacgtgttttggacgttgtagggacctttggaaggatatgagaaggaaa
ctttggggtattgtggagagcaagtacttcagcaggggcattatgattgcaattcttatc
aacaccatcagcatgggcattgaacaccacaaccagcccgaggaactgaccaatgtcctg
gaaatctgtaacattgtcttcaccagcatgtttaccctggagatgatcctaaagctctca
gcttttggcttttttgagtacttgaggaacccatacaacatctttgatggcattattgtc
atcatcagtgtgtgtgagatcattggtcaggcagatggtggtctgtcagtgctgaggacg
ttcaggctgctgagggtcattaagctggtgaggttcatgcctgcactgagaaggcagctt
gtggtcctgatgaagaccatggacaatgtggccaccttctgcatgctgctcatgctcttc
atattcatcttcagtatcttggggatgcatatatttggctgtaagttcagtttgaagaca
gaggcaggagatacggttcctgacagaaagaactttgactccttgctttgggctatcgtc
actgtatttcagattctaactcaggaggactggaacatggttctctacaatggcatggcg
tccacctctccctgtgccgctctttacttcgtcgcccttatgacatttgggaactacgtg
ctcttcaatttactcgtcgccattttggttgaaggttttcaagcagagggtgacgcaaat
cgctcctattcggatgatgacaggtcctcctgtaattttgacgaaaatgataagcaaaaa
gactcccttcacctctcagacccaaagatctgtaccctgacccctaacggacacctggac
atgtcattgttgcctgctggtctgtttccaggagagaagttgacctttgcactcggctcc
agaaagaacagtgttatttctctcggcagagctgacctggagaggagggctgcgtatcca
ggtcgaggttaccacaactggggccgtccgctgcctccccagcctcaccccttgtgggcc
cgtcgctccagctggagcagccttgggggccgaccctgctcctcctcatctccctctgcc
agccctgccttcacgcctccgtctgcaaggcctttttacggctacggtctggggggtctc
ggagggatggtagggggaagcctccgtatccgcggccctcgtgcctcctcgtctccccac
catcaccatcatatccagccagatgaagaggagtcccttctctctccacctgctgccgct
cctcattgtcttcagctgccgcatccgaagctccatgactattttgtacctcgtcgggac
cgcagagctctctccctagagctcccacacatgctccagtctccagctggaaacccacag
caacatcatgctctccctcccgtgaaactccatgctcaccacaggaaaaagagcctctct
ggagggcttgtgatcagcaccggtggggacttggaaggaatccaccaagactgtaatggg
aagacgccactgtcgcacctgctccttccaccctcaaggcggcagacggagcagaccgga
ggggtgaacctccagagccacctgatgacggatgtcttcccccaggtcaacacacgcagc
aaggacagggaggacctggatgacgacattgaatatagcttatgcttccgaatccagaag
atgttggaggcatacagaccagactggtgtgagacgagagaagactggtccatctttctc
ttctctccgcagaacaagttcagacaggtgtgccagtccatcatcgcccataagctgttt
gactatgttgtgttggctttcatcttctccaactgcatcacagtggctcttgagaggcca
aagatccttcaaggcagcttggaaagagtctttctcaccatttccaactacatctttact
gccatctttgtgggcgagatgactctcaaggtggtttccatgggactgtatatgggcgag
caggcttatctgcggagcagctggaacattctggatggattcctggtttttgtgtcgttg
attgatattgttgtgtccatggcgggaggggcgaaaatcttgggcgtgctcagagtactg
agattgctacgaacgttgcgtcccctcagagtgataagcagagctccaggattgaagctg
gtggtggagacgctcatcacttccctcaagcctatcggcaacatcgtccttatctgttgc
gcattctttatcatctttggtatccttggcgtacagctttttaaaggcaaatttttctac
tgtctcggccctgatgtcaaaaacatcactaacaagtcagattgtctggacaaaaagtac
aagtgggtccaccataagtacaactttgataacttaggacaggcactgatgtctctgttc
gtacttgcctctaaagacggctgggtaaatatcatgtaccatggcctggatgcagtgggt
gttgatcaacagccaataaccaacaacaacccatggatgcttctgtacttcatttccttc
ctcctcatcgtcagcttctttgtcctcaacatgtttgttggtgtggtggtggaaaacttc
cacaagtgtcgccagcatcaagaagtggaggaggccaagagacgtgaggagaaacgacaa
cggcggatggaaaaaaagaggaggaaagctcagaagctaccttactactccagctacggc
aatatgcgcctgatgatccacacactctgcacaaaccactacctggatctcatcatcacc
ttcatcatctgtataaatgtcatcacgatgtcattagagcactacaatcaacctcgctcc
ctggaccttgcactaaagtactgcaactatttctttacctctacatttgtgttggagtcc
attctcaagctcatcgcatttggattccggcgcttcttcaaagacaggtggaatcagctg
gacctcgccattgttctcttgtcagtaatgggcatcactctggaggaaattgagatcagc
gccgctctgcccatcaaccccaccataatcagaatcatgagggttctgaggatagcacga
gtgttgaagctgctgaagatggcaaccggaatgagagccttattggatacagttgttcaa
gccctgcctcaggtgggtaacctgggcctgctcttcatgctgctgtttttcatctacgcc
gccttaggagtagagctttttggagaacttgtttgcaatgaagactatccatgtgaaggt
atgagtcgtcatgctacctttgaaaactttggcatggccttcctgaccttgtttcaagtc
tccacgggcgacaactggaatggcatcatgaaggacacattgcgggagtgcccaccaaac
catgactccggtgtggactatggctgcaatccgagccttcagtttatctcgcccatgtat
tttgtctcctttgtgctcaccgcccagtttgtgctcatcaatgtggtggtggccgtgctg
atgaagcacctggacgactccaacaaggaggcccaagaggaggcggagatggatgcagaa
attgagctggagctggcccagggcaccctctgttgcatgggcgcccccagttgtgggggt
ttgggggttgacaaaggacttttgactgttggatcggggcttggagctgcgccagggaga
agggagaggggcggaggtgccagaggcgagacgggggaaggagggaggaggttgcgacat
cccgtaacaaaccagggaccttacaattcctgtgattctcctcagtcatattcgccagca
caagagagccagtggttggacagcgtatctctcctaatcaaggatacaatagatggggag
atgctgatgatcgacaacctctccggctccgtcttccaccattactcctctccgcctgtc
tgcaaagactgcaagggccacccgcaagagcagatcagaatggcagagattgagcaggca
tcactgaagtcggagcaactctcagataagtcctcgtctcctgctctccctgacgacctg
agcctggacgaacataccagctacatactgctgatgcaagacgggaagggaaggtgcagc
agtagctcccataactctgatgaggccgatggtggaggaggcggccatggaggtggtcat
cagactgaggaacaaggtcaaggtcagggggcttccctgcaatgcagggcttccagctcg
gacacagagacagagactgaactgcaagagatggaaatgcaaacataccacacaaagatg
tgctcacctctctgctcccctggtgggatttccagcatcagcagcaaggacagaggcaaa
ggagacgaggaaaagggggccagtggcatttctaccctctttcatctgcctgctgagttt
ttccactctgcaggagcagccatcccggtaccttcacgcagtcggagcctgcgtttgtca
agaggcctcaggctgacctccccagcctcttgggtctcattccgctcccctggagcccct
cgaaagatgctctgtgcacaatacccatcccacagtgactcgtcccttgccactggtagc
tctgaaggcagcctccagacaaccctggaagaaggactgagcttcagtgtttctccatcg
cagaacctggaattgccaattccaacagcttccttatcacccatgtgccctatctcacag
cctgaagacagaattactatttcctctccacttcaggccctaaagcctagggtgaaccct
ccatcttctgtaacccttctggccaccaggggacaccaacggagccagagcagtggacga
ggcagcacaagccccggctacaatcgtgacgactccattgacccgtcagatgaagacttg
ggaataggcattggctcgtctatcggtggttgtggctccagccaagcgggcaacagtgaa
catttatcagaggcgctgagcagcatgtcactgacatctttgctgccgcctagcaccatc
ctatgccctggaggacaagtaaagaagtgcaacagcacaggtagccttgacaaggggggt
cttctgctgtcttcccggtgcagggaaggccgcagggaaattatgggaatggagctaatg
gacccccagggctttttggccaacccttggacaggagtactaggtgacagcagaagagga
gagggaactggagtaataaaagatgcagagcacagcttgaaagggaagagctcaagccaa
acaacagtggggtcttgtcgaaaaaatagatga
DBGET
integrated database retrieval system
