Xiphophorus maculatus (southern platyfish): 102230784
Help
Entry
102230784 CDS
T02923
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102230784
04082 Neuroactive ligand signaling
102230784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102230784
Ion channels [BR:
xma04040
]
Ligand-gated channels
GABA-A
102230784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CBM_17_28
DUF7205
Motif
Other DBs
NCBI-GeneID:
102230784
NCBI-ProteinID:
XP_005797780
Ensembl:
ENSXMAG00000015502
UniProt:
M4AM52
LinkDB
All DBs
Position
19:7882486..7898293
Genome browser
AA seq
528 aa
AA seq
DB search
MGFVRAEAVHRAQPRALTHRLRPPQQGASLPAQFLFSALVVWRRVWQDGSSLTAFRPTHI
SAXRASRFPLATAGTPVELQAPVMKRERSSRPLSVLVCFIVLWQTRLRAVGNSTQNSKDI
ATFTKILDSLLDGYDNRLRPGLGDRVTEVKTNVYVTSFGPVSDTDMEYTVDVFFRQSWLD
ERLKFHGPMKILPLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLYTMR
LTVQAECPMHLEDFPMDSHSCPLKFGSYAYTKTEVTYIWTRNASQSVDVADDGSRLNQYD
LVGQTVGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESV
PARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK
RGWAWDGKSIVNDKEATVKKEKNTYAVAVANYKPNITKDSTLPTISKCTLNEPNKMKPEQ
NKKTFNSVSIIDRISRIMFPVLFGTFNLVYWATYLNREKVIKDLDPSK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgtcagagcagaggctgttcaccgtgcgcagccgcgcgctctcacgcacaga
cttcgtccgcctcagcagggagcctctctccccgcgcagtttttgttttcagctttggtt
gtttggaggagagtctggcaggatggaagctctctgaccgccttcagacctactcacatc
tccgctnngcgtgcatcacggtttcccttagcaacggcgggcacacctgtcgagcttcag
gctccagtcatgaaaagagaaagaagctcgcgtcctctgtctgtgctggtctgcttcatc
gttctgtggcaaacacggttgagagcagtcggtaattcaacacagaactccaaagacatt
gcaacattcaccaaaatcctggacagtctcctagatgggtatgacaacagactcagacct
ggccttggagaccgagtgacagaagtaaagacaaacgtctatgtgaccagttttggacca
gtgtctgacacagatatggaatacacagtggatgtcttcttccgtcaaagctggttggac
gaacggctgaagttccatggaccaatgaagatccttcctctcaacaatctgatggccagt
aagatttggacccctgacacattctttcataatggcaagaaatctgtggcccacaacatg
accatgcccaacaaacttctgaggatcatggagaatggaacgctgctctacactatgagg
ttaacagttcaagctgagtgtcccatgcatctggaggacttccccatggactcacattca
tgtcctcttaagtttggcagctatgcctacacaaagacagaggtaacttacatctggaca
agaaatgcctcccagtcagtagatgtagcagatgatgggtcgaggctcaaccagtatgac
ttggttggacagactgttggaaaggagaccattaaatccagcactggtgaatacacagtg
atgacggctcattttcacttaaagaggaagattggatactttgtgatccagacgtatttg
ccctgcatcatgacagttatcctatcccaggtttccttctggctcaaccgggaatcagtg
cctgctagaactgtgtttggagtaaccacagttctcacaatgacgaccctgagtattagt
gcccgtaactctctgccaaaggtggcctacgctactgccatggactggttcattgcagtc
tgctatgcatttgtcttttctgctctcattgagtttgccactgttaactacttcaccaag
cgaggctgggcttgggatggaaaaagtattgtcaatgacaaggaagcaactgtcaagaag
gagaagaacacctatgctgtagctgtggcaaactacaagcccaacatcactaaagactca
acactgcccaccatctccaagtgcactctgaacgagcccaacaagatgaagcccgagcag
aacaagaaaaccttcaacagcgtcagcataatcgaccgcatctcccgtattatgttccct
gtgttgtttggcaccttcaacctagtctattgggccacttacctgaatagagaaaaagta
atcaaagacctggatccatctaaatga
DBGET
integrated database retrieval system
