Xiphophorus maculatus (southern platyfish): 102230887
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Entry
102230887 CDS
T02923
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102230887 (chd7)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102230887 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
Chromo_MIT1
HTH_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102230887
NCBI-ProteinID:
XP_023190598
Ensembl:
ENSXMAG00000018590
LinkDB
All DBs
Position
6:10283475..10371066
Genome browser
AA seq
3279 aa
AA seq
DB search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NT seq
9840 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagcctctttggtgacgatgcagggttgttctcggacgaa
ttggatagtttgggagactgcttcccccagcagtcagcggctggcccagccaacccactc
gccccacccacaaacccatctctgaaccacgagcaccagggaaccagggcttaccaccaa
gggatgcttcatggcactgggaccggaccggggcagtccaaactggggcagatgtatgag
cacagcccgtatacaggctacgatcaagcgggtgcccccggaggacggatgatggcccag
aacggtcccagccagggctcgccgactgtgaacacggccatgaacggcatgacctcccac
taccacaacaccccagctaactctagcaacactcaccacgggtaccagggtgatgcaggg
gcagcaggaggaggcgggggcggagtttggggcccacagcagcagagcagatctgtgtat
cagcaggcttcagcaccatcaggggctggtcccaaccagatgggaagctaccaaatgtct
caaggcaactacgctggcatgcaaggtcctcctacatccggtgcagcgcgcatgaatcaa
cactacccttcacagagcatggcccccgttccagctcaggacccatctcactacttagga
catgttgggatggggggggtccagatgagacagcctcagccgcagccccagaactatccc
aacatgggccacgcacctcgatacccacactccccttctagacaacctccacaccagcac
caacagggcatgccaccattcgggggtgctcagtaccctggctatcagccccaatatgct
gccatggggcctgggatgggccagggggctaatgctaacgtcagcgctaacaccagccag
gccatgggagcagggcagctgggccagaggttcaaccagggagtgagctcagcaccgggg
caacagggacaacgatacccctctgttccaccccaccagccccactctgcctcaatgcag
cagcaggcagggcagcaaggccagcctatgcatcccctaaaccaccccccgaatcttccc
caacctccaaaccaatcccaatcccaccttaccgccccagctcagggatcttacccctcc
ccgtcgtctatgtccccaatgcgggttctgggaaccccaactcctcctccccagcaagga
agaccccccagcgcaggactagccgggcctccggatgtcgcaggatacacagcaatgcat
tctccgcccagtgctatggcccatgcacagagaactccccagacctccctatctgcagca
cacccacaacaccagcagccccacaacatgcctcccagtgcagggcaaatttatcctggc
atggggcctcagcgtggaccacaaatcgggccgactcggctccagcaaccacaagggcct
cacgaagcctcagtcagccagggggtggaccagcgcctgctccaggcccagcagcaggcc
tctcgaggtgggcagcccatgccgtctgctcctatggggttccagggtcaacacggagcc
cctgcccctaaccagggcttagctccacctgcccagaacactcagacgcagcacacgcat
ctgcccccacacccccaccacctgcaaagcacgccccctcctcccagccaggcctcccac
ccatgggcacctcagccatctgccccccacccactctcctcaccccctcttaccccacag
aaagtgcctcacatacagcattccccctcagacctgtcaggtgatgcctcaatgatggtt
accgacaggccgacggttggtgccggagcccccagccagcctatcagcacagagaagcct
actgatcaggagaccaagccaaaaaagaagaagaaaaagaaagctaaagcggtggaagaa
aaagaagatggaggcaagaaagaagcgagagaaggaggagatgaagacgtaaagtctgag
tttcctgcagcaggaagcaatgcaagtgaacagcttattggcacaggagttgttgaaggg
agtttgcccccaccagaggagaagaagaagcggaaaaagaaaccaaaggagaagacggag
ggcaaggagcccaaagagcccaagaccccgaagacccccaaaacacctaagactcccaaa
gagcccaaggagcccaaggagaagaaagccaagagcaccacacccaaggccaagactccc
aagaaaaccagcagtaaaaaggtggaatcagagggcggggccagcgctgctaagaaggac
gccaagaggaagagagagctgtcagtcggtgacgatgtggaggtgaagtctccactgccc
tctcctcctgaagaggaggatgatgatggtgtgcagaagcgccgttcgagtcggcaggtg
aagaggaagaggtacacagaggacctggagttcaggatctctgaggacgatgacagcgga
gacgattcaccaacaccaaaatctccctcatcctcctcacaacaacaggatctgactgag
gctgaagggcctgttgtggagaagatcatgggtatgcgcagcgccaagaagcaactggag
tcgggcgaggaagtggaggtggaggagttctacgtcaagttcaagggcttttcatacctg
cactgtcgctggtcggaactggaggagctggagaaggacaagagaatccaccagaagata
aagaggtttaaagccaagcagcaactcaacaacttcatcactgagatggatgatgagcct
tttaatccggactatgtggaggtggaccgagtcctggatgtttcagagagcacagatgaa
aatggagagattgtcaccttatatttggtgaaatggtgcagtttgccttatgaagacgcc
acctgggagctaaaggcggacatcgaccaatctaagatagatgaatacgaacgcatcgca
gcgcgcgaacccaacactaaccgagtggatcggccttctgcagccgactggaaaaagctg
gagagctccagagaatacaggaatggcaacgcactcagggaataccagctcgaaggcctc
aactggctgactttcaactggtacaactcacgtaactgtatcctggcagacgagatgggg
ctcgggaagaccatccagtccattacattcctctatgagatatacataaagagcattgag
gggccattcctgatcatcgctcctctctccaccatccctaactgggagagagagttcagg
acctggacggagctcaatgtggtggtctaccatggcagccaggccagccggaaaaccatc
caggcctatgagatgtactacagagacacacagggtaagataataaaaggtgtgtatcgg
ttccatgctgtcatcacaacatttgagatgatccttgccgactgtccggagctgcgcagc
atcccatggcgctgcgtggtgatcgacgaagcccaccgcctcaaaaaccgaaactgcaag
ctgctggaggggctcaaaatgatggatatggagcacaaagtcctgttgacaggaactcct
cttcagaacacagtggaggagctcttcagcttactcaacttcctggaaccagagagattc
ccgtctgaacagactttcatgactgaatttggagacttgaagactgaagaacaggtccaa
aaacttcaaggtattttgaagcccatgatgcttagaagactgaaggaggatgtggagaag
aacctggcccccaaagaagaaaccattatagaggtggagttgaccaacatccagaagaaa
tactatcgggccattctggagaaaaacttctccttcctgtccaaaggaggcgcaggagga
agtggatcagctagtgtgcccaacctcctcaacaccatgatggagctgaggaaatgctgc
aaccacccctacctcataaatggagcggaggagaagatcatcgaggagttcagggattcc
cacggcggcaggattgatgtgcctgaaatggccctccaagctatgatccaggcagctggg
aagctagtgctcatcgacaagctgctgcccaaactaaaagccggaggacacagggtgttg
attttcagtcagatggtccgctgcctggacattctggaggactacctcatccagagacgc
tatccatatgaacggatagacggccgcgttcgggggaacctgcgacaggcagccatcgac
aggttttccagaccagattcggaccgatttgtcttcctgctctgtaccagagctggtggg
cttggcatcaacttaaccgcagcggatacatgcatcatcttcgactctgactggaaccct
cagaatgaccttcaggctcaggcgagatgtcatcgtatcggccagtccaagtcggtgaag
atctaccgcctgatcaccaggaacagctacgagcgggagatgtttgacaaggccagtctg
aagcttgggctcgacaaggccgtcctccagagcatgagtggccgagagaacgccaacagc
ggggttcagcagttgtctaagaaagagattgaagacctactgagaaaaggcgcttatggc
gctttgatggacgaagaagacgaaggctcaaaattctgcgaggaagacatcgaccagatc
ctccagagacggacccacaccatcactatcgagtcggaggggaaaggctccacgtttgct
aaggccagtttcgttgcaacaggaaaccgaacagacatttctctggaggatccagacttc
tggcagaaatgggccaagaaagcagagctggacatggacgccatcaacggccggaacact
ctggtgatcgacacgcccagggtgaggaagcagacgcggcactacagcagcgtgaaagag
gacgaaatgctcgagttctctgagctggagagcgacgacgacgagcctagcaagccgtct
tccaaacaacgacggcctcaagacaaaacccagggatatccccggtccgagtgcttcagg
gtggagaagaacctgctcgtctacggttggggtaggtggagtgacatcctcgctcacggc
cgcttcaagcgtcccctgaaggaggcggacgtggaaacgatctgcagggctctcctggcc
tactgtctgctgcattaccgtggcgacgagaacatcaagagcttcatctgggacctgatc
actccaagtgaagatggctccaccaggacgctgacgaatcactctggtctctctaccccc
gttcccaggggcaggaaggggaagaagggcaagatgactactcctcctcctcagacgcca
cgagctgattggctggccacctgcaaccctgaccatttactgcaggaggacagctacaag
aggcacttgaaacatcactgtaacaaggttctgctgagagtccggatgttgtattatctg
cgacaggaagtcatcggtgaccaagctgagcgcattctggaaggagccgactccagcgtg
ttggatatctggatccctcagccgttccacgctgaggtcccagctgactggtgggacaca
gaggctgacaaatccctgctcatcggcgtcttcaaacacggctatgagaagtacaactcc
atgcgtgccgaccctgccctgtgcttcttggagcgagtgggcatgccagacgccaaagcg
atcgccgctgaacagaggggctctgacatgatggcagatggcattgagggtgaggatgag
gatccagagtataaaccgatacgtatgccatttaaagacgacctggacgatttcaccaac
tctcccctggatgacaaagatgatgcagttgaaggcgagactgaagttaaatcaggtgag
aatggccaaaacgtgccgtctgtgggcggagcttctggctccagcgagcgactgtattgg
ccagcggcctcggccctgacggccaggcttcgccgtctgatcacggcctaccagcgctcc
aaccgcagagagcagctccgtcaggaggcactcaacagacccgacggtcgccgacgacga
cgcagggagttcctgccttccatccccatggttcctgaaacgggaggcgctaccacgtac
atccaggatggcacggcggtgttcatgacagacggaagcccatatttggctaaaggaaga
gcttattttgccaaaggtggtcagtttctgccagaggcttcgccagtgatgacggccaac
tccctgatgtctgatggatccctgtattatagagagcggagacaaaggtggacgcgtcgt
gaggaggcagacttctaccgcgttgtgtccacctttggagtcgtgtttgatacgcagcgt
caaaagtttgattggacccagttcagagcgtttgcccggctggacaaaaaaacagatgag
agtttggagaaatattactactcattcattgccatgtgcaaacgggtatgcaggatgcag
gtcaagaccgagacagaactcccagacccgaccctgatcatcgacccaatcaccgaggag
cgcgcctctcgcaccctgtaccgcatcgagctgctgcgccgcatccgagagcaggtcctc
cctcacccgctgctgtctgagcgcctcaagctctgccagccgtctcccgacctgcccgag
tggtgggagtgcgggcgccacgaccgtgacctcctcctgggggcctcgaagcacggcgtc
agccgtacggattatcacatcctcaacgaccccaccttgggcttcctggaggcccaccag
cgcttcaccagtcagcgaggcgccgtcggcatcggctctcttggagaactcggcagagtc
ggaatggggatcgcagaagcggcctctgcgccacttctcacgactgcagagctggagagt
gccgcagccgctgccgaaatggccgtggacgcagctgaagaggaggaagaagggaaggct
gtaaaaatggaagaagagaaaacagaagtggaggtaaaaatggaaacagaggaggaagat
tccagcaacattccatgtatgaagactgaaccccttgagcaaaagagaaaccaggacaat
gctgatgaagtgaaagaagaggcagctgcttcactcatgaaggtcaaagctgaagacgtt
ttgccagaggttgagaaagacgatgatgaagcgaaaccagaaagccagacgacaaataac
caagatcacgacatgacagaagaaaagatcagcacaagccctgaatattacctaagcaac
gagatagacgttggcgctgagctcccagaatcctctgctgaagcacaacttggccccaag
actgcagaggaggaagatggcgaggagaaggagacttctgaatgtcttaaatctccaaag
tctgctgaaaccgagaaaagccctgaggaagaggaggaggaggagaggctggatgaagat
gacaaatcggagaagtcctctcaggctgaagcgagcgcagggcagaagaacttcgacgag
gagagcatcgcttctctgagcacgtccgtacgggacgagacccgagacgagttctgtccc
gacgacctgcaggaaacgtctgtgctgcacaccctgcaggaccgcgcctacgccttctct
ttctggcctaaggaccgcgtgatgatcaacaggctggataacatctgcgaggctgtcctg
aagggcaagtggcccgtcaacagacggcacgtcttcgacttccctggcaacctcttgccc
ggtcacgggtccgcggcaaccgcagccgccgtagccatggtgagcgagagcccgctgcag
agacggagccttgccgagctgacgatggccggcatccacacgccgtacagcgggagcgaa
gacaaaacgctgtctccgcaggttcatgacgacgctctgagcctgacggtgcctcgacag
aggaggaggagaaggaaaaagattgagatcgaggcagagagagcggcgaagaggcggaac
ctgatggagatggtggctcagctgagggaaagccacgccgccgcagagtctcagaaccag
gccattgacctcactaagggcgtgcaccaccactacaaagcttctccgtcattggccggc
ttccccagtgccttgatgacgaacccttccctcaaggcccagatggatttgcttcagcaa
gtcccgccttccggacacagagccaacggttcgttggacgccgacctgcccatcacgaag
aggaggcggggccgcaggaaaaatgtggagggcctggagctgctgttcatgggcaacaag
agagcagccggggatgattccgatgggacaaagatttcaggagtggaggcggtccaggaa
gcgccccagtcccacagaccgatcagcgtcccggagcagagccccaacgcccgctctctg
gcctcaggcagcctggaggaggaggagacgcccgtctccagcaaagacctgggagagtgg
ctgagacagcatcccacatacaccatggacatgactggattcacaccaaagagcgaggag
ttgctgttatctcagttctccaagcccaagcagaagcgccatcgctgtcgaaaccccaac
aagatcgacataaacacgctgaccggagacgagagagtccccgtggtcaacagacggaat
ggacgcaagatgggtggggccatggctccaccaatgaaggagctccccaggtggttattg
gagaacccagagttctccatcgctcctgattggacagacatcgtcaaacagtcgggtttc
ctcccggaagccatgtttgaccgccttttgaccggccctgttgtcagagaggaaggcgtt
cgtcgtcgagggcggcgacccaaatcggagatagtgaaggctgccgccgccgctcaggcc
gcagcggcagcgcaggctgcacaggcgtcgctggcgtcagccgcttcctctgcaggggga
atcaacccgctgctgctcagcagcctgttcggagggatggacctgtcgtctctccagagc
cttcagtcgctccagttggctgctggtctgatggccttcccgccacctgctgaccctaaa
cagtccgccgccaacgccgccgccgcctccatgctgcccctcatgatccccagcatggga
gggctgcccaatatggccgccgccattcccaacatgttcagccttggaggaatatttgga
ggtaacctggcggccgccgccgctgccaccgccgcttccaacgccgcttccggaaacacc
aacgggacgctggagggagacggaggcaacggggaggagacggcaaagagggagaaggag
gcgagagaagacggagacgagatgggagaggaagatgatgaagaagaggagacggcggag
ggagaggaggagggcgtgaaaaagaccaagaagaggaagatggaggaagaggttgaaaaa
aaggagaaacctgtcggcgatgcgtccggtgctcccaagatggcggccgccgaggctcca
gcagaggcttccatcaacggggacacagccgccctgctggccgccgccggtatgtcggcc
aactccctggcgttcaaccctttcctgctgtccaccatggcgcccagcctcctctacccc
tccatgttcctcccgccgggcctggccggcctcagcctgcccggcttccccaccgcctcc
ctcgccgagctgcagagcgccatggccggggcgctgggcgacagcgcctccaccccaaac
ccgccgagagacgccgagggggagaagagggacgacgggaaggctgcggacgacgaggag
gaagaggaagaggaggagggagaggagacggactcggcggagcagaaagaggaaggagcg
acgggcggaggaatgccggaggagtcggcggcgtctccccagaacggaacgagtgactga
DBGET
integrated database retrieval system
