Xiphophorus maculatus (southern platyfish): 102230913
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Entry
102230913 CDS
T02923
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xma03009
]
102230913 (ddx54)
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102230913 (ddx54)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
Pre-60S particles
Helicases
102230913 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
102230913
NCBI-ProteinID:
XP_005803796
Ensembl:
ENSXMAG00000005312
UniProt:
M3ZT06
LinkDB
All DBs
Position
8:14732287..14740821
Genome browser
AA seq
849 aa
AA seq
DB search
MAQRKKKLTKKKRHNREQEVDSDGDFQLAAEIKDDDSPGRKLPRFPVASDCTSDVEPDTR
ELVRAQNKKKKKSGGFQSMGLSFPVYKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMART
GSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTRLKTALILG
GDSMEDQFAALHENPDIIIGTPGRLMHVITDMNLKLHGVEYVVFDEADRLFEMGFADQLQ
EIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDAKLSDQIKLSFFHLRVDD
KPALLLHLLRNVAKPQEQTVVFAATKHHVEYLNELLSSEGIECAYIYSALDQTARKINIG
KFVHRKAMVLIVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRSGTAYSMV
CPDEMPYVYDLHLFLGRPVQFATADHTQDSDGVFGRVPQSILDDEGSHLITAHENSLDLQ
NLHRVSENAYKQYLKSRPNPSAESIRRVKSTDVSSMAVHPLLGSGLEKNELERLQLVDAI
KSYKSKSTIFEINSNSKTPASEVMRKKRSKDKQVVDKFNKQRENVAAGSRLRQSAPPRAT
AGDNEEEDLQGVFSEVLGVKRRNVQEDAERLKSKKSRETGKEEEYYIPYRPKDFNSERGL
SLGGEGSHFEQQASSAVLDLMGDEGDQLNQHKKIMRWDRKRKRFVKESGKEEQNKKIRTE
SGQIVHNKKRKNFYEEWKKKYKVEDAGSGSDGETGGRKRSAGGRGRGRRGASSHSPAAPQ
VTAGGRRIRSELRSSSQILKHRKLKQKQQFLQGGGMKKIRSKNKQWVGEMKKSGFGRGGQ
KKGKMRKRL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaaagaagaagctgacgaagaaaaaaagacataacagggagcaggaggtt
gactctgatggagactttcagctggctgctgaaattaaagacgatgattctccagggagg
aaactgccacgcttccctgtggcgtcagattgcacatctgatgttgagcccgacaccagg
gaactcgtccgagcccaaaacaagaagaagaaaaagtctggagggtttcagtccatgggt
ctcagctttcctgtttataagggtgtcatgaagaagggttacaaagtccctactccaatt
cagaggaagaccattcctgtgattctggatgggaaggatgtggttgccatggcaaggaca
ggcagcgggaagacggctgcttttctggtgcccatgtttgagaaactgaaggcccctcaa
gcccaaacaggagcccgagctctcatcctgacccccaccagagaattggccctccagacc
atgaagttcacaaaagagctgggtaaattcacacgcttgaagactgctttaattcttggt
ggagacagcatggaggatcagttcgccgcgcttcatgaaaacccagacataattattggc
acccctggacgtctcatgcacgtcatcacagacatgaacctgaagctgcacggtgtggag
tatgtggtgtttgatgaggctgacaggctgtttgaaatgggttttgccgatcagcttcag
gagatcatccgcaggcttccagacaccagacagaccctcctgttctccgccactctgccc
aaactcttggtggagtttgccagagccgggctgacagaacctgtgctgattcgcctggat
gttgatgcaaaactcagtgaccagattaagctgtcgttcttccacttgcgtgtggatgac
aagccggcgctgctgctgcacctcctgaggaatgtggcaaagcctcaggagcagacggtg
gtctttgctgccaccaagcatcatgtggagtacctgaatgagctgttgtcttcagaaggc
atcgagtgcgcctacatctacagcgccctcgaccagactgccaggaagatcaacatcggg
aagtttgtgcaccggaaagccatggtgcttattgtcactgatgtagcagctcgtggtata
gacatccccctgctggacaatgtcatcaattacaactttccgtccaaagcaaaactcttc
ttgcacagagtcggccgtgtgggacgtgcgggacgcagtggtacagcgtacagcatggtg
tgtccagatgaaatgccgtatgtctatgatctccacctgttccttggaaggcctgttcag
tttgcgacagctgaccacacacaggattcagacggtgtgtttggaagagtccctcagagc
atcttggatgacgaaggctcccatctgatcacggctcatgaaaactccctggacctgcag
aacctgcatcgcgtctcagagaatgcctacaagcagtacctgaagtccagaccgaacccg
tcggcagagtcaatcaggcgggtgaaaagcaccgatgtgtccagcatggccgtacatccg
ttactcggttctggtttggagaaaaatgagctggagcgccttcagttggtcgacgcaatt
aagagctataagtccaaatcaactatttttgaaatcaactctaacagtaagacgcctgca
agtgaggtgatgcggaagaaacggtcaaaggacaagcaggtggtggacaagttcaacaag
cagagagagaacgtggcggcgggaagcaggctgcggcagtcggctccccccagggccact
gctggtgataacgaggaggaagatctgcagggggtgttctcagaggtgctcggagttaag
agaaggaacgtgcaggaagatgcagaacgcctaaagagcaagaaaagcagggaaacgggc
aaagaggaggagtattacatcccttaccgacctaaagacttcaactctgagagaggatta
agcctcggtggagaaggcagtcattttgaacagcaggcctcctcagctgtcctcgacctc
atgggagacgagggcgaccagttaaaccagcacaaaaaaattatgagatgggaccgaaag
aggaagcgttttgtgaaagagtcaggaaaggaggagcaaaacaagaagatcagaaccgag
agcggacagattgtgcacaacaagaaacggaaaaacttctacgaggaatggaagaagaaa
tataaagtcgaggatgcaggatctggttcagatggagaaacgggtggaaggaagagatct
gcaggaggtcgtggccggggccggcgaggagccagctcccacagccccgcggctccccag
gtgacggcaggcgggcgcaggatccgatctgagctgagatccagctcacagatcctgaag
caccgcaagctgaagcagaagcagcagttcctgcagggcggcggcatgaagaaaatccgc
agcaagaacaaacagtgggtgggagagatgaagaagtcgggcttcggacgtggaggccag
aagaagggcaagatgaggaagaggctgtga
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