KEGG   Xiphophorus maculatus (southern platyfish): 102230948
Entry
102230948         CDS       T02923                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2 isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102230948 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102230948 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xma03021]
    102230948 (ell2)
Protein phosphatases and associated proteins [BR:xma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102230948 (ell2)
Transcription machinery [BR:xma03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     102230948 (ell2)
    Little elongation complex (LEC)
     102230948 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 102230948
NCBI-ProteinID: XP_005813880
Ensembl: ENSXMAG00000005547
UniProt: A0A3B5PPG3
LinkDB
Position
20:complement(25903265..25920644)
AA seq 672 aa
MLRLQRNDGGGLVKMAALSEDGSYGLNCGQQGAERVSVLHVKLTETALRAIENYQSSSNV
PSSRPKVQFKGLQGHIKIPRTDSSDAFHNFDFYLSNVGKDNPQGSFECIHQYVSSSGASH
LALLATVQDKVTVCATNDSYQVTRERMTQAAEDTRERGTKVIKPGGQYRGKQVHTRKPAL
SAPDVVPERKRSTPINPANTIRKCLSNNPVSQKPFRDRIIHLLALKSYKKLEVLGRLQRD
GINQKDRNSLGTTLQQVAILNPKDNTYSLKESIYRDVQRDWPGYSEDEKIQADRILARKL
GLPTERVSSNSLPKDGFPSSPQKHQADFDFIDPLAPKKARISHLSSRGPSASSSDRREDE
SSPRSKHSSLPPSVTSGPPTHLPIPSHPPAPSHRQLSPASNSNSPSTPEGCGTQDLPMDQ
SSSCRDPSPSPFSRSLQERCQHPAPREAASPSPPPCTSLTVASTVVTSPPLSSSTSKKFK
KKSKKHKDKDRERVKGKQTERASSSIPPDAVAEESHRVRKRRSAEEDIEVAVEKNPYKDQ
VKEKPVHSSEPSSKTDVPDYVVKYAPLASLDQRQSYKDDFNAEYDEYRQLHARVESITRR
FSQLDARCRKLVPGTKEYQKVQEEVLKEYKKMKQHNPNYHEEKQRCEYLHNKLAHIKRLI
ADFDQRRAQTWC
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgctccggcttcagaggaacgatggtggagggctggtaaagatggcggctctctccgag
gatgggagctacggattaaattgtggccaacagggtgctgaaagagtatccgtactacac
gtcaagttgaccgagacggccctgagagcgatagaaaactaccaaagtagttcgaatgta
ccatcttcaaggccaaaagtacaattcaagggacttcaagggcacattaaaattcccagg
actgactcctcagacgccttccacaactttgatttttacctgtctaatgtgggcaaggac
aaccctcagggaagctttgaatgcatccaccagtatgtgtccagctcaggggcctcacac
ctggcattgttggcgaccgttcaggacaaggtcacagtgtgcgccaccaatgactcctac
caggtgacccgggaacgtatgacccaggccgcggaggacacgcgtgaacgggggaccaaa
gtcatcaagcctggggggcaataccgaggaaagcaggtgcacactcgtaagccagcactg
tcggccccagatgtagtcccagagcgcaaacgctccacgcctatcaacccagccaacact
atacgcaagtgcctttccaacaaccccgtatctcagaagcccttccgggaccgcattatc
cacctgctggcgctcaagtcctacaagaagctggaagtgctaggccgtctgcagcgggac
ggtatcaaccagaaggaccgaaactcactggggactaccttgcaacaagtggcaatcctg
aatcccaaagataacacttactcgctgaaggagtctatttatcgcgacgtgcagcgagac
tggcctggctattctgaggatgagaagatccaagctgaccggattctagcccgcaaattg
ggtctccctactgagagagtctcatcaaacagtttgcctaaagacggtttcccttcatcc
ccacagaagcaccaggcagacttcgatttcatcgaccctctggctcccaagaaagcccgc
atctctcacctcagcagccgagggccctcagcctcgtcctccgaccgccgcgaggacgag
agcagcccccgctccaaacactcatccctgccccctagcgtgacctcagggcctcccacc
catctccccataccttcccacccgccggcgccgtcgcatcggcagctcagcccagcttcc
aactccaactcccccagcaccccggaaggctgcggcactcaggacctgcccatggaccag
agctcttcctgcagagacccctcgccgagccccttctcccgctccctgcaggaacgctgt
cagcacccggcccccagagaggccgcctctcccagcccgcccccctgcacctctctcaca
gttgcctccactgttgtcaccagccctcctttgtctagcagtacaagtaagaaattcaag
aagaaatccaagaagcacaaagacaaggaccgtgagagggtcaaagggaaacaaacggaa
agagcttccagcagcattcctcctgatgcggtggcagaggagagtcacagggtgagaaag
aggcgcagcgctgaggaagacatcgaggtagctgttgagaaaaatccttacaaagatcaa
gtcaaagagaagccagtccattcctctgaaccttcttccaaaactgatgtgcccgactat
gtagtgaagtacgccccgctggcgtctctcgaccagagacaaagctacaaagacgacttc
aacgcagaatacgacgagtaccgtcagctgcatgcccgcgtggagagcatcaccaggcgc
ttctctcagctcgacgctcggtgtaggaagctggttcccggcaccaaggagtaccagaaa
gtacaagaagaggtcttgaaagagtacaaaaagatgaaacaacacaaccccaactaccat
gaagagaaacagcgctgtgaatacctgcacaacaagctggcccacatcaagcgactaata
gctgattttgaccagcgcagagcccagacctggtgttga

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