Xiphophorus maculatus (southern platyfish): 102231084
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Entry
102231084 CDS
T02923
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102231084
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xma01001
]
102231084
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102231084
03036 Chromosome and associated proteins [BR:
xma03036
]
102231084
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
102231084
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102231084
Protein kinases [BR:
xma01001
]
Serine/threonine kinases: Other
TAF1 family
102231084
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102231084
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
102231084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
102231084
NCBI-ProteinID:
XP_023198158
Ensembl:
ENSXMAG00000011406
LinkDB
All DBs
Position
11:complement(20831615..20846940)
Genome browser
AA seq
1979 aa
AA seq
DB search
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEGDSVLDNESKKHLAGLGTLGLGSLITEIT
ANESENKEENRESVSVDSEGWVKSTDDAVDYSDISEVAEDETKKYHQAMGSLQPSRKTDD
EDDYDADCEDIDSKLMPPPPPPSLPTPTKKEESPAGTNVGEEGDGIILPSIIAPSSTADK
VDFSSSSDSESETERPCQGSGVLGPPDSLTLPLAGIMQKDAAKALPSVTQLFPEFKPGKV
LRFLRLFGPGKNMPSVWRSARRKKKRKHRDPQPGTPPPEEDASEPSQEKKSGWIYEYALP
PPPEQCLSDDEITMMAPVESKFSQTSGDADKETESRPRVAEWRYGPAQLWYDMLGVPEDG
SNFNYGFKLKEDQPNEAEEQDLPKEVTEPPEEVLKEDDNMDVDDDGGDGDKVRRILENEL
FLMVTQLQWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTRSNSQL
VPPIPLPIPKASSISGSKREKSSHDNQASLEEDCSWFSIFPIDNEELVYGRWEDNIIWDD
QEMDHFLMPPVLTLDPNDENIILEIPDEKEEATSHSPSKENKKETAIKKSRILLGKTGVI
KDEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPFFPTHMG
PMKLRQFHRPTLKKYSFGALAQPGPHAVQPLLKHIKKKAKMREQERQAAGGGDMFFMRTP
QDLTGKDGDLILAEYSEEYPPLIMQVGMASKIKNYYKRKPGKDPGAPDCKYGETVYCHTS
PFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVIRTRHGYYIRELVDIFVVGQECPL
FEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKL
CADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSF
FAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPTGCGEGFSYVKV
PNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDV
VRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTD
SSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEESDRDNKGRKER
RKGLSSALSTSSHKDDDTSSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKASVID
AYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKIKGPPEKKSK
KVKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHN
DNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGSAVHCDYLNKP
HKAIHRRRTDPMVTLSSVLEGIINDMRDHPNTYPFHTPVNAKVVKDYYKIINRPMDLQTL
RENVRKRMYPSREEFREAVELIVKNSATYNGAKHPITQVAQSMLDLCDAKLKEKEDRLVR
LEKAINPLLDDDDQVAFSFILDNIVTQKMMVVLDSWPFHHPVNKKFVPDYYKVIVNPMDL
ETIRKNISKHKYQNREIFLSDVSLIHANSIKYNGPDSPYTKTALEIVDVCKGTLAEYDEH
LTQLEKDISTAKEAALDAADLESLDPMTPGPYTPQPADLFDSVASGSLPREPSSLFSEGP
LLVAPEKRGGQGRHMRRPGEEDSDVDIEGFEEEDDGKPKTPAPAEDADGDLEDEDDEEML
LPPRRRLHDDDERGHGRSNHPAQSSVLYQDLLMSDGEDDASDEEGDNPFSGIQLSESGSD
SEREVDIRPAPPRRAQDTARMGMEQDESMMSYEGVGNEHMEDSNISYGSYEETESRSQMQ
PSSMGNGEEYGISEEEEEDEEDEARRRGPAVLSQAQLSEDEDSEEFRSIGGDSDMDSDN
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcagacagcgatgaagaccaagaccgacccttttccctcactggcttcctg
tttggaaacatcaatgaagatggccagttagagggagacagtgttctggacaatgagtcc
aagaagcatcttgctggtttggggacgttgggtctgggctctctcatcaccgagatcacg
gccaatgagagcgagaataaggaggaaaacagagaatctgtaagcgtggattcagagggt
tgggtgaaaagcacagacgatgcagtggactactctgacatcagtgaagttgctgaggat
gagactaaaaagtaccaccaggcaatggggtctttgcagcccagcaggaaaacagatgat
gaggatgattatgatgccgactgtgaggatattgactcaaagctaatgcctcctccacca
ccgcctagtcttcctactccaactaagaaagaagaatcgcccgccggtacaaatgttggg
gaagagggcgatggcatcatcttgccctccattattgcaccatcttccactgccgataag
gtagatttcagcagctcttcagactctgagtcggagacggagcggccctgccagggttca
ggagttctagggcctccggacagtctcacccttcctcttgcgggcatcatgcagaaggat
gctgccaaggcgttaccaagtgtcacacagctctttccagagtttaagcccggcaaggtt
cttaggtttttacggctgttcggtcctggtaagaacatgccttcagtttggaggagtgcc
cgcaggaagaagaagcggaaacacagagaccctcagccggggactcctccgccagaggaa
gacgcctcagaaccaagtcaggagaaaaagtctggatggatttatgagtacgcactccct
ccacccccagaacagtgtctctctgacgatgagataaccatgatggctccagtggaatca
aagttctcgcagacatccggggacgcggacaaagagacagagtctcgacctagagtagca
gaatggagatacggtccggcccagctctggtacgacatgctgggagtacctgaggacgga
agcaacttcaactacgggttcaaactcaaagaagatcagcccaatgaggctgaagagcaa
gatctgcccaaagaagtaacggaacctcctgaagaggttctgaaggaagacgacaacatg
gatgtagatgacgatggtggcgatggagataaagtgaggcgaattctggagaacgaactg
ttcctaatggtcactcagctccagtgggaggacgatatcatctggaacggagaagatgta
aaacacaagggaaccaagactcagagagccagcttggcaggatggctcccctccagcatg
acccgaaatgctaacgcttataatgcccagcagggtctgacccgaagcaattcccagctg
gtcccaccgatacctctgcctattccaaaagcttcctcgatctctggctcgaagcgggaa
aaaagcagccacgacaatcaagcctctctagaagaagactgttcgtggttttccattttc
cccattgacaatgaggagctggtgtacggccgctgggaagacaacatcatctgggacgac
caggagatggatcactttctcatgccgccggtccttacactggatcccaatgatgagaat
ataatactggaaattcccgatgaaaaggaggaggcaacgtctcattcgccgtcaaaggag
aataagaaggagacggcaatcaagaagagtcggattctgttggggaagaccggcgtgatt
aaagacgagccacaacagaacatgtcccaacctgaagttaaagatccctggaacctctcc
aacgatgagttctactatcccaaacagcaaggcctgagaggaacgtttggtggcaacatt
attcagcactctattccagcacttgagctgaggcagcccttcttccccactcacatgggt
ccaatgaagcttcggcagttccatcgaccgaccctgaagaaatactcttttggagcttta
gcgcagccgggtccgcacgctgttcagccgctgctcaaacacatcaagaagaaagccaag
atgcgagagcaggagcggcaggcggcaggcggcggagacatgttcttcatgcgaacgccg
caggacttgaccggtaaagacggggatctgatcctggcggagtacagcgaggaatacccg
cctctcatcatgcaggttggcatggcgagcaagatcaaaaactactacaaaaggaaaccc
ggaaaggatccaggagcgcctgactgtaaatatggagaaacagtttattgccatacctcc
cctttccttggttctcttcatcctggtcagcttcttcaggcgtttgaaaacaacctcttc
cgtgctccaatctacctgcacaagatgccagagacggattttctcgtcatacgaactcga
cacggctactacatcagggagctcgtggacatttttgtcgtcggtcaggagtgcccgttg
tttgaggttcctggtccgaattccaaacgtgccaatactcacatcagagacttcctgcag
gtgttcatttaccgcttgttctggaagagcaaagaccgtcctcggagaatccgcatggag
gatataaagaaagcttttccctcacactcagagagcagcatcaggaagcggctcaagctc
tgcgctgacttcaagcgtacaggaatggactcaaactggtgggtgctgaagcctgacttc
aggttgcccacagaagaagaaatcagagccatggtttctccagagcagtgctgcgcttac
tacagcatgctggttgcggagcagaggcttaaggatgctgggtatggtgagaagtctttc
tttgctccagaagaggagaacgaagaggattttcaaatgaagatcgatgacgaggtccgg
acggcaccgtggaacacaaccagagccttcatctccgccatgaaggggaagtgtctgttg
gaggtcacgggagtggcagatcccactggctgtggagaaggtttctcatatgtgaaagtg
ccaaacaagcccactcaacaaaaagatgacaaagagccacagcctgtaaaaaagacggtg
accggaacggacgctgacctgaggaggctctctctgaagaacgccaagcagctccttcgc
aaatttggtgtgccagaggaagagatcaagaagctttcccgttgggaggttattgacgtg
gtgaggaccatgtccacggagcaggcacgttcaggcgaaggcccgatgagcaagttcgct
cgaggctctcgcttctctgtcgccgaacaccaggagcgctacaaggaggagtgtcagagg
atctttgacttgcagaacaaagtgttggagtccacagaggtgttgtccacagacacagac
agcagttcagctgaagatagcgactttgaggagatgggtaagaacattgagaacatgctg
cagaataagaagaccagctcacagctttcccgcgagagggaggagcaggaaaggaaggaa
ctgcagaggatgctgatgggcgaggagagcgatcgtgacaacaagggacgcaaggagcgc
cgcaaaggcttgtccagtgccttgtccaccagctcccacaaagacgacgacacgtcctcc
gtcaccagcctgaactcgtcggctacggggcgacgactcaagatctatcgcaccttcagg
gacgaggacggcaaagaatacgtgcgctgcgagacggttcgtaaagcgtccgtcatcgac
gcctacacccggatcagaaccaccaaggacgatgagttcatacgaaagtttgccctcttc
gatgagcagcacagagaggagatgaggaaggagcgccggcgtattcaagagcagctcagg
aggctgaagagaaaccaagagaaagacaagatcaaaggacctccggagaagaagtccaag
aaggtcaaggagagaccagacctcaaggtaaaactgaagtgcggcgcgtgtggagccatt
ggacacatgagaaccaacaaattctgcccgctgtactaccaaaccaacgccccaccctcc
aacccggtcgccatgacggaagagcaggaggaggagctggaaaagactgtgatccacaac
gacaacgaggaactcatcaaggtggagggcactaagattgtactgggcaagcagctcatt
gaaagtgccgatgaggtgcgcagaaagtctttggtgctcaagtttcccaagcagcaacta
ccaccaaagaagaagagacgcgttggcagcgccgtccattgtgattacctcaataaacca
cacaaggcaatccaccgcagacgcaccgaccccatggtcaccctgtcatcggtgctggag
ggaatcatcaacgatatgcgggatcaccccaacacgtaccccttccacacaccggtcaac
gccaaggtcgtcaaggattactacaagataatcaatcggcccatggacctgcagacgctg
agggagaacgtgcggaagcggatgtacccatcgagggaggagttccgggaggccgtggag
ctcattgtcaaaaacagcgccacatacaacggagcgaaacatcccattacacaagtggcg
cagtccatgcttgacttgtgtgatgctaagctgaaagagaaagaggatcggctggtgagg
ctggagaaagcgatcaacccccttctggatgatgacgaccaggtggcgttttccttcatc
ctggacaacattgtgactcagaaaatgatggtggttcttgattcgtggccgtttcaccat
cctgtcaataaaaagtttgtgccggattattataaggttattgtaaatcctatggatctg
gagactatccggaagaacatctccaagcataaataccagaatcgggaaatattcctttca
gatgtcagtctcatccacgccaacagcatcaaatacaatggtccagacagtccgtacacc
aagaccgccctggagattgtagatgtgtgcaaaggaaccttagcagagtacgatgagcac
ctgacccagctggagaaggacatctctacagccaaggaggcagctctggacgcagcagac
ttggagagcctggacccaatgacacccgggccgtacacgccgcagcctgctgatctgttt
gacagcgtggcttcagggagtctacccagagagcccagcagccttttctctgagggacct
ctgttggttgctccagagaagagaggggggcagggacggcacatgaggagaccaggagag
gaggactcagatgtggacatcgagggcttcgaggaggaagatgatgggaaacccaagact
cctgctcctgcagaggacgccgatggagatctggaggacgaagacgatgaagagatgttg
ctgccgcctcgcaggcggctgcacgacgacgacgagcgaggacacgggcggtcgaaccac
ccggctcagtccagtgtgctgtaccaggatctgctcatgtctgatggagaggatgacgcc
agcgacgaagaaggggacaacccgttctctggcattcagctatcagaaagcggcagcgac
tctgagagggaagtggatatccgacccgcgcctccgcggagagctcaggatacggcccgc
atgggcatggagcaggatgagagcatgatgtcgtatgaaggggttggtaatgaacacatg
gaagacagcaacatcagctacggcagctacgaggagacggagagtcgcagtcaaatgcag
ccgtccagcatgggaaacggcgaagagtacggcatcagcgaggaggaggaggaagacgag
gaagatgaagcgcggagaagaggcccagctgtcctgtcccaagcccagctcagcgaagac
gaagacagcgaggagttccgatccatcggaggagacagtgacatggactctgataattag
DBGET
integrated database retrieval system
