Xiphophorus maculatus (southern platyfish): 102231093
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Entry
102231093 CDS
T02923
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102231093 (ddx4)
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102231093 (ddx4)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102231093 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102231093
NCBI-ProteinID:
XP_023184944
Ensembl:
ENSXMAG00000009677
UniProt:
A0A3B5R029
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All DBs
Position
24:5189494..5195831
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AA seq
639 aa
AA seq
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MDEWEEEENKATTFTAASYSSNDAAGRDSWKSEHGEFGRGRGGKGRGRGGFWNSSADGDS
RESNEDGERHGFSGRGGRGRGRGFNRMNSDSLSEDGDGAHENGFRGRGRGGRGGRGGFRQ
DAEQGGRGGFGGGYRGKDEETFNPGEDKGSVKDDPDSDKPRVTYVPPTLPEDEDSIFSHY
KSGINFDKYDDILVDISGTNPPRAIMTFDEAALCESLRKNISKSGYVKPTPVQKHGIPII
SAGRDLMACAQTGSGKTAAFLLPILQQLMTDGVAASRFSETQEPEAVIVAPTRELINQIY
LEARKFAYGTCVRPVVVYGGVSTGHQIREILKGCNVVCGTPGRLLDMIGRGKVGLSKVRY
LVLDEADRMLDMGFEPDMRRLVGSPGMPSKENRQTLMFSATYPEDIQRMAGDFLKLDYLF
LAVGIVGGACSDVEQKFVQVTKFSKREQLLDILKTTGTERTMVFVETKRQADFIAVFLCQ
EKVPTTSIHGDREQRERELALTDFRSGKCPVLVATSVAARGLDIPDVQHVVNFDLPKDID
EYVHRIGRTGRCGNVGRAVSFFDPEVDGGLARSLVTVLSKAQQEVPPWLEESAFSSHGAG
FNPRKTFGSTDSRKTGSFQESSGKSQAAAQAAADDEEWE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagaagaggaaaataaagcaactacatttacagcagccagctattcc
tctaatgatgcggcaggaagagactcatggaaaagtgaacatggtgaatttggacgaggt
cgagggggcaaagggagaggcagaggaggattttggaactccagcgcagacggagacagc
agggaatctaacgaagacggggaaagacatggtttcagtgggagaggaggtcgagggcgt
ggccgaggattcaacaggatgaactcagacagtctctctgaggatggtgatggagctcat
gagaatgggttcagagggcgaggaagaggaggtcggggaggaagaggaggattcagacaa
gatgctgagcagggaggaagaggaggatttggtggaggttaccgtggaaaagacgaagag
accttcaatccaggagaagacaaaggttcagtcaaggacgaccctgatagtgacaaaccg
agagtcacatacgttcctccaacgctccctgaagacgaagactccatcttctcccattat
aagagtggaatcaactttgacaagtacgacgacatcttggtggacatcagcggcaccaac
ccccccagggccatcatgacctttgacgaggcggccctgtgtgagtccctgaggaaaaac
atcagtaagtctggctacgtgaagccgaccccggtgcagaagcatggcatccccatcatc
tctgcaggcagagacctcatggcctgcgcacagaccggctctgggaagacggctgctttc
ctgctgcccatcctgcagcagctcatgacggacggcgtggcggccagtcgcttcagtgag
acacaagaacccgaagccgtcatagtcgctccaaccagagaactcatcaaccagatctac
ctggaggctaggaagtttgcttatgggacgtgtgtccgacctgttgtggtctatggagga
gtcagcactggacaccagatcagggaaatcctgaaaggatgtaacgtggtgtgtggaact
cctggacgtctgctggacatgattgggagaggaaaggtgggactgagtaaggtgcggtac
ctggtgctggacgaggccgaccggatgttggacatgggctttgagccagacatgcggcgc
ctggttggctcccctgggatgccgtccaaggagaatcgtcagactctaatgtttagcgcc
acctaccctgaagacatccagaggatggctggcgacttcctaaagctggattatctgttc
ctggctgtgggcattgtgggcggagcctgcagcgacgtggaacagaagtttgtacaagtc
accaagttctccaagagagagcagctgcttgatatcctcaaaaccacaggaacggagcgt
accatggtgtttgtggagaccaagagacaagcagacttcatcgctgtgttcctgtgccag
gagaaagttccaaccaccagcatccatggtgaccgagagcagagggaacgggagctggct
ctgacagatttccgctctgggaaatgtcctgttctggtggccacctccgtagctgcccgt
ggtctggacattccagatgttcagcatgtggtgaactttgacctcccaaaggacatcgac
gaatacgtccatcgtattgggagaactgggcgctgtgggaacgttgggagagccgtgtca
ttctttgacccagaggttgacggggggttggcccgctccctggtcacggttctgtccaag
gcgcagcaggaagtgccgccatggttggaggagtctgccttcagcagccacggcgccggc
ttcaaccccaggaaaacattcggctccacggattccagaaagacgggctccttccaggag
agcagcgggaagagccaggctgcagctcaggctgcagctgatgacgaggaatgggagtga
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