KEGG   Xiphophorus maculatus (southern platyfish): 102231109
Entry
102231109         CDS       T02923                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04137  Mitophagy - animal
xma04144  Endocytosis
xma04145  Phagosome
xma04148  Efferocytosis
xma05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xma00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102231109
   04145 Phagosome
    102231109
   04137 Mitophagy - animal
    102231109
   04148 Efferocytosis
    102231109
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102231109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xma04131]
    102231109
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xma04147]
    102231109
   04031 GTP-binding proteins [BR:xma04031]
    102231109
Membrane trafficking [BR:xma04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    102231109
 Endosome - Lysosome transport
    102231109
Exosome [BR:xma04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102231109
  Exosomal proteins of other body fluids (saliva and urine)
   102231109
  Exosomal proteins of colorectal cancer cells
   102231109
  Exosomal proteins of bladder cancer cells
   102231109
GTP-binding proteins [BR:xma04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    102231109
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 102231109
NCBI-ProteinID: XP_014329050
LinkDB
Position
10:complement(7093525..7103771)
AA seq 223 aa
MAGRGGGANRPNGAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKEL
QRQASPNIVIALAGNKADIADKRAVEFQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKSEPQGGAGQGGRTRTGVDLQEATPAGRGGGGGGCCGGH
NT seq 672 nt   +upstreamnt  +downstreamnt
atggcagggcgcggcggtggagcaaatcggcctaatggtgctgcggcggcaaacaaaatc
tgccagttcaagctggtgctgctgggggagtcggctgtgggcaagtccagcttagtgctg
cgcttcgttaaaggccagttccacgaattccaggagagcacaatcggagctgcgttcctc
actcagacggtctgtctggacgacaccactgtgaagtttgagatttgggacacagcgggt
caggagcgataccacagcctcgccccaatgtactacagaggcgcacaggcagccatcgtg
gtttacgacatcaccaacacagacacatttgcacgtgcaaaaaactgggtgaaggagctt
cagaggcaagccagtcccaacatcgtgatcgctctggcaggcaacaaggcagacatcgct
gacaagagagcagtggaatttcaggaggcgcaaacatacgctgacgacaatagtctgctc
ttcatggaaacttcagccaagactgcgatgaatgtcaatgaaatttttatggccatcgca
aagaagcttccaaagagcgagcctcaaggcggagcaggacaaggcgggcggacaagaacc
ggggtggatctacaagaggcgacccccgcaggccgcggtggcggcggcggcggctgctgc
ggcggccattag

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