Xiphophorus maculatus (southern platyfish): 102231215
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Entry
102231215 CDS
T02923
Symbol
thbs2
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04145
Phagosome
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102231215 (thbs2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102231215 (thbs2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102231215 (thbs2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102231215 (thbs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102231215 (thbs2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102231215 (thbs2)
00536 Glycosaminoglycan binding proteins [BR:
xma00536
]
102231215 (thbs2)
Membrane trafficking [BR:
xma04131
]
Endocytosis
Phagocytosis
Opsonins
102231215 (thbs2)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102231215 (thbs2)
Exosomal proteins of colorectal cancer cells
102231215 (thbs2)
Exosomal proteins of bladder cancer cells
102231215 (thbs2)
Glycosaminoglycan binding proteins [BR:
xma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102231215 (thbs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
cEGF
Laminin_G_3
EGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102231215
NCBI-ProteinID:
XP_023183490
Ensembl:
ENSXMAG00000003209
LinkDB
All DBs
Position
22:11128468..11166807
Genome browser
AA seq
1185 aa
AA seq
DB search
MILRRSLLFLLFISTFHQVTPQDGEQEDETSFDLFEISHITRKTLGAKQFRGQYSDLPAY
RFIRFDHLPPVSAPILKQILQQIQNNEGFVFIASIRQDRSSRGTLIGLEGPDGRRQFEIV
SNGRANTLDLVYWVDGSQNVVSFEDVDLADSQWKNITLHIHGENANLFVGCSLIDSFILD
EPFYERLQADGSRMYVAKGSIRENHFRGLIQNVRFIFDTSVEDVLLSRDCEVTRLDDDNG
LRESAEIVDVSPSITTNIIGPKTDDLGADMCERSCEELSTMFQELKGLRVVVSNLIDGLQ
KVTEENTVMKEALGRMKDTKEKNMCWQDGRLFEDKEDWVVDSCTKCKCQESKIVCHQITC
PPVACASPSLIDGECCPVCMPKDSEDGWSPWSEWTECTVTCGIGTQQRGRSCDATSNPCT
GPSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDC
EGSGRETQSCTAKPCPIDGGWGPWSPWATCSATCGGGIKSRSRECNSPHPQYGGKKCIGE
ATDSDSCNKEDCPIDGCLSNPCFGGVDCSSSADGSWECGPCPAGFRGNGTHCKDINECDM
VSDVCYKVGETQRCINTDPGFHCLPCPKRYKGTQPFGMGVEAARKNKQVCEPENPCKEKT
HSCHKYAECIYISHFSDPMYKCECRTGYAGDGFLCGEDSDLDGWPNQNLVCSANSTYHCK
KDNCPNLPNSGQEDFDKDGQGDACDKDDDNDGIMDERDNCPLLYNPRQFDFDKDEVGDRC
DNCPYEHNPAQIDTDHNGEGDACAVDIDGDEIQNENDNCPYVYNTDQKDTDMDGVGDQCD
NCPLLHNPDQTDVDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDAC
DYDDDNDGIADDKDNCRLTPNPDQEDADGDGRGDACKDDFDNDSIPDILDVCPENNAISV
TDFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTMYV
NTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGE
NLRNALWHTGNTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMAD
SGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPEFPTVFIR
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggagaagtctcctcttcttattgttcatatccacattccatcaagtaaca
ccgcaagatggagagcaggaagatgaaacatcatttgacctgtttgaaatcagccacatt
acgcgcaagactctgggggccaaacagttccggggtcaatactccgatcttcctgcctac
cgcttcatccgctttgaccacctgcccccagtcagtgcccccatactgaaacaaatacta
cagcaaatccagaacaacgagggctttgtgttcatcgccagcatccggcaggatcgctcc
tcgaggggcaccctgattggcctggagggccccgacggccggcggcagttcgagattgtc
tccaacggacgggccaacaccctggacctggtgtactgggtggacggttcgcagaacgtg
gtctcattcgaggatgtggacctggccgactcgcagtggaagaacatcacacttcacatt
catggggaaaacgcaaatctgtttgtgggctgcagcttgatcgacagcttcatcctggac
gagcccttctatgaacgccttcaggccgatgggagtcgaatgtatgtggcaaagggatcg
attcgtgagaaccacttcaggggcctcattcagaatgtgcgcttcatctttgatacatca
gtggaagatgtcctccttagtagagattgtgaagtcacaagactagacgatgacaacggc
ttgagagagagtgcagagattgtggatgtaagcccgtccatcaccacaaacatcataggt
ccaaagacagacgacctgggtgcagatatgtgtgaacgctcctgtgaggaacttagcacc
atgttccaagagctgaaaggtctgcgtgtggttgtcagtaacctcattgacggtttgcag
aaagtgacagaggagaatacagtcatgaaggaggcccttgggagaatgaaggacactaaa
gagaaaaacatgtgctggcaggacggccgcttgtttgaggacaaggaagattgggtagtg
gacagctgcactaaatgtaaatgccaggagtccaagatagtgtgccaccaaattacatgc
cctccagtggcctgtgccagcccttctttaatagatggagaatgctgccccgtctgcatg
cctaaagacagtgaagacggctggtccccttggtcggagtggacagaatgcacggtcact
tgtgggataggaactcaacagaggggtcgctcatgtgatgccaccagtaacccctgcact
ggaccatctatccagactcgaaagtgcagcttgggaaaatgtgacagccgtgttcgccag
gatgggggttggagtttgtggtcgccttggtcgtcttgctcggtgacctgtggagaaggg
cagatcaccagaatacggcactgcaacgctcctgtaccacaactgggtgggaaagactgc
gaagggagcgggagagagactcagagctgcactgccaaaccttgtccaattgatggaggc
tggggaccgtggtctccttgggcaacttgctctgcaacatgtggaggaggaatcaaaagt
cgttcccgtgagtgcaacagtcctcatcctcagtatggtggcaagaagtgcattggagag
gctaccgacagcgacagctgcaacaaggaagactgccctatcgatggatgcctgtccaac
ccttgctttggaggggttgactgcagcagctcagcagacggttcctgggaatgcggcccc
tgtcctgctggttttcgtggaaatggtactcattgcaaagacattaatgagtgtgacatg
gtgtctgatgtttgttacaaagtgggtgaaacacagcgctgcatcaacactgatccgggt
ttccactgtctgccttgcccaaagcgctacaaaggcacacagccctttggtatgggtgtt
gaggcagccaggaaaaacaaacaagtatgtgagccagaaaacccatgtaaagaaaagacc
cacagctgtcacaaatatgctgaatgtatatacatcagccactttagtgacccaatgtac
aaatgtgagtgtcgcactggctacgctggagatggctttctatgtggagaggactcagac
ctggatggatggcccaatcagaacctggtctgcagtgccaacagtacataccactgcaaa
aaggataactgtcctaacctaccaaactctggacaagaagactttgacaaggatggacaa
ggagacgcttgcgacaaggatgatgacaatgatggaattatggacgaacgagacaactgt
cccctcctttacaatccccgccagtttgactttgacaaggacgaagtaggtgaccgctgt
gacaactgtccctatgaacacaaccctgcacaaatagatactgaccataacggtgaaggc
gatgcctgtgctgtggacattgatggagatgaaattcagaatgaaaatgataactgcccc
tatgtgtacaacactgaccagaaggatacagacatggacggggttggtgaccaatgtgac
aattgcccattgcttcataatcctgaccagactgatgtggacaatgacctggtaggagac
cagtgtgataataatcaggacattgatgaagatggccatcagaacaatttggacaactgt
ccttatgtggccaatgccaaccaggcagaccatgacaaggatggaaaaggagacgcctgt
gactatgatgatgacaatgatggcatagctgatgacaaggacaactgcagactgacacct
aacccagaccaagaggatgccgatggtgatggaagaggggacgcgtgcaaagacgacttt
gacaatgacagcatcccggatatcctcgacgtgtgtccagagaacaatgccattagcgtt
acagacttcaggaagttccagatggtccacttggatccaaagggaacaactcaaattgat
cccaactgggtggtcaggcaccagggcaaagaactggttcagactgcaaactctgatcca
ggcatcgcagttggttttgatgagttcaatgctgtggactttagtggaaccatgtatgtg
aacacagacagagatgacgactatgctggctttgtcttcggctatcagtcaagcgggcgc
ttttacgttgtgatgtggaagcagatcacacagacgtactgggaggacaagccatccaaa
gcctttggcatctccggcgtttcacttaaagttgtcaactcaaccacgggaactggggaa
aacctcaggaacgctctgtggcatacggggaacactgccggacaggtgcgcactctgtgg
catgaccccaaaaacattggttggaaggattacacagcttaccggtggcatctcatccat
agacccaagactggctttataagggttgtggtatatgaagggaaacagatcatggctgat
tcaggaccagtttatgacaagacatttgcgggaggcaggttaggcctctttgtcttctcc
caagagttggttttcttctccgacctcaaatatgagtgcagagataaaccggagtttcca
acagtgttcatcagataa
DBGET
integrated database retrieval system
