Xiphophorus maculatus (southern platyfish): 102231325
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Entry
102231325 CDS
T02923
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102231325 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102231325 (nup58)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102231325 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Siah-Interact_N
Nup49_C
PSY3
Tox-ODYAM1
Dynactin_p22
TBCA
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
102231325
NCBI-ProteinID:
XP_005803384
Ensembl:
ENSXMAG00000000717
UniProt:
A0A3B5QP68
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All DBs
Position
21:15024976..15036130
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AA seq
594 aa
AA seq
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MSGFNFGGGNLGSTNTGGGFTFGGVPSAPAANAGGLSFGTPLGTAAATPASTTSSTPSLG
LGGVLFAQKPAGGFSFNTPASTSSAAATGLTLGAPATTSAATGFSLAFNKPTASATPFSL
TTTTSSTTGAGLSFGSILTSTAPQQPGATGFTLGLGGMTTSTAASTVPSLGAGLFSSTGT
SGLGQTLGGGTGLTLGSLLATSTAASAAPAPSIGLGGVDFSTSSESKSDASSGTNAQDSK
ALKDENLPPFICQDVDNFQKFVKEQKQVQEDISRMSSKTISKVQDDIKSLKQLLSVCASG
LQRQGLAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVDQFEVQLQQF
RQQIEELENHLTTQSNGSHITPQDLTLAMQKLYQTFVAQAAQLQSVHENVKILKHQYLSY
RRAFLEDSTDIFESKRASNRKWQSAPQVTTGPAPFSSVPNAAAVAMAATLTQQQQPTPGT
QAPLGAGFGNPFASAVGTSLGSSTLGGFGGGPGFGGVGTGGSSFGFSSTNKPAGGSLSAG
FGSTSSSGFNFSNPGINQSAGLTFGVSNQPGSAFGTTPALQLKKPPAGNKRGKR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttttaactttggcggtgggaatctgggctccaccaacacgggtggaggattc
acatttggtggcgtcccaagtgcacctgcggccaatgccggtggcctttcgtttgggact
cctctgggaacagcagctgccacccctgcttctaccacgagtagcaccccatctcttggt
cttggaggtgttctttttgcccagaaacctgcgggaggtttttctttcaacacacctgcc
tcaacatcctctgcagccgccacaggtcttacattaggcgcccctgccactacatctgca
gccaccggctttagtttggccttcaacaagcccactgcgtctgcaactcctttttcgctc
accaccaccacctcctccactactggggcaggtttaagtttcggctccatcctgacatcg
acagctccacagcagcctggagccacggggttcacgctcggtcttggtggtatgacaacc
tccacggcagcctcaacggtgccgtccctaggcgctggtctcttctccagcactggaacc
tcaggtttgggtcagactcttggaggaggaaccggacttaccttggggtcactattggct
acctctacagcagcatcagctgctcctgccccgagtattggtctgggtggagttgacttc
agcacttcctctgagagtaagagtgacgcctcatctggaaccaatgcacaggacagcaag
gctttaaaagatgagaacttgccaccgttcatttgccaagatgttgacaattttcaaaaa
tttgtgaaagagcagaagcaggttcaggaagacataagcaggatgtcatcaaagactatt
tctaaagtccaagatgacatcaaaagcctcaaacaacttctctctgtctgcgccagcggt
ctgcagcgccaaggtctggctattgataaactgaagttggagacagcacaggagcttaaa
aatgctgacatagcactgcggacgcaaaagacgccccctggacttcagcatgaaaacacg
gctccatcagattattttcgtagcctggtggaccaatttgaggtgcagttgcaacagttc
cggcagcagatagaggaactggagaaccacctgactactcagagcaatggctcacacatc
accccgcaagatctgactctggccatgcagaaattataccaaacatttgttgcacaagct
gctcagcttcagtctgtccatgaaaatgttaagatcttgaaacatcagtacctttcttac
cggagagccttcctggaagactccactgacatctttgagtccaaacgagcctccaacagg
aaatggcagagcgcgccacaagtcacaaccggacctgccccattctccagtgtaccgaat
gccgcagctgttgctatggcagccacgttgacccagcaacagcagccaactccaggcacc
caggcacctttgggggcaggttttggaaacccctttgcctcagcagtaggcactagtttg
ggctcttctacacttggaggttttggaggtgggccagggtttggtggagttggaactgga
gggtcttcttttggattctcctccaccaataagcctgcagggggcagtctgagtgcaggt
tttggtagcaccagcagctccggcttcaacttcagcaaccccggcatcaaccagtctgct
gggctgacatttggtgtttcgaaccaaccaggcagtgcctttggcacaaccccagctctc
cagctgaagaagccccccgctgggaataaaagggggaaaagatag
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