Xiphophorus maculatus (southern platyfish): 102231399
Help
Entry
102231399 CDS
T02923
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102231399 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102231399 (copa)
Membrane trafficking [BR:
xma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102231399 (copa)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102231399 (copa)
Exosomal proteins of bladder cancer cells
102231399 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
102231399
NCBI-ProteinID:
XP_005796611
Ensembl:
ENSXMAG00000005462
UniProt:
M3ZTH7
LinkDB
All DBs
Position
6:24316510..24333820
Genome browser
AA seq
1222 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADAVTLFDVQQK
RSLATVKIAKVKYVVWSSDTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAVQMAADLDMEAA
GGEGWGDDAELTMDEDGFIDAQDGLGDEGLGKEEGGGWDIDEEVELPPELDVPLGAGGST
EDGFFVPPTKGMSPAQMWCNNSQLPVDHILAGSFETSMRLLHDQVGVVNFAPYKSLFMQT
LSRGRTSYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTAGRF
EEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMEVERKKLPKETLDQQK
RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILAACEKTLTDTHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPPYKGQICR
VTQVTEIGKDVIGLRVSPLQFR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaaatttgaaaccaagtctgcgcgtgtgaaaggtctgagttttcatccaaaa
aggccatgggttcttgcaagtttgcacaatggtgtcatccagctgtgggactatcggatg
tgcacactgatcgataaatttgatgaacatgatggtcctgtcagaggaattgatttccac
aagcagcagcctctttttgtgtctggaggagatgactacaaaatcaaggtgtggaactac
aagctgagacgctgtctttttacccttttgggacacctggactatatcagaactacgttc
tttcaccatgaatatccatggattctgagtgcctcagatgatcagaccatccgcatctgg
aactggcagtcgaggacttgtgtatgcgtcctgacgggacacaaccactacgtgatgtgt
gcccagttccacccatcagaagacttggtggtgtccgccagtctggaccagacagtgcga
gtgtgggatatctccggtttgaggaagaagaacctgtctccgggcgccgtggagacggac
gtgcgcggcatcaccggggttgacctttttggtgcctctgatgcggttgtgaaacacgtc
ctggagggacacgaccgtggggtcaactgggctgctttccatcccaccatgccgctcatc
gtgtctggagccgacgacaggcaggtcaagatctggagaatgaacgagtccaaggcgtgg
gaactcgatacatgccgcggccactacaacaacgtttcctgcgccgtcttccatccgcgc
caggagctcatcctgtccaactcggaggacaagagcatccgggtgtgggacatgtccaag
cggaccggagttcagacctttcgccgtgatcacgatcgcttctgggtgctgggagcccac
ccaaaccttaacctgtttgcagctggtcatgacagcggtatgatcgtcttcaagctggaa
cgggaacgtcctgcttacgctgtgcatggcaacatgctgtactacgtcaaagatcgcttc
ctccgccagctggacttcaacagcagcaaggacactgctgtcatgcagctccgcagtggt
tctaagtttccggttttcagcatgtcgtataatcctgctgagaacgctgtcctgctctgt
acaagagcgaccaacctggagaacagtacatacgacctctactcaattcccaaagaaagc
gactcccagaaccctgatgcaccagagggaaaacgatcatctggcctgactgcggtgtgg
gtggcaagaaaccgatttgcagtccttgatcggatgcactctcttctgattaaaaacctg
aaaaatgaaatagtgaagaaggtccaggtgccaagctgcgaggaaatcttctacgcagga
accggctcgctgctgctgcgcgacgccgacgccgtcacgctgttcgacgtgcagcagaaa
cgctctctggccacggtcaaaatcgccaaggtcaagtatgtggtgtggagctccgacact
tcccacgtggctctgctggcaaaacatgctattatgatctgcaaccgtaagttggagagt
ctctgcaacattcatgagaacatcagagtgaagagtggagcctgggatgagagcggcgtc
ttcatttataccacctccaaccacatcaaatacgccctaacttcaggtgatcatggcatc
atccggaccctggacctgcctatttatgtgacccgggtcagaggcaacagtgtttactgt
ctggacagggagtgcaggcctcgcgttctcaccatcgacccgactgagtaccgcttcaag
ttggctctggtcaatcggaaatatgatgaggtgctccacatggtgcgaaacgccaaactg
gtgggtcagtcgataattgcctaccttcagaaaaagggctaccctgaggtggcgctccac
tttgtgaaagacgagaagactcgtttcagccttgctctggaatgcggaaacattgaggtg
gcgctggaggcagccaaggccttggatgagcgcagctgctgggagcgtctgggcgaggcg
gcgctgctgcagggacaccaccaggttgttgagatgtgctaccagaggaccaagaacttc
gacaagctcaccttcctctacctcatcactggtaatctggccaagctgcgcaagatgatg
aagattgctgagatcagaaaggacatgagcggtcactaccaggcggctctgtatctgggg
gacgtcagtgagagagtccgaatcctgaagaactgcggacagaagtctctggcttacctc
actgcagccactcatgggctggatgaagaggccgaggcactgaaggagacctttgaccca
gaaaaggagactgtgccagaggttgaccctaatgcacagctgctgcagccgccgcctccc
atcaaccccctggacaccaactggcccctgctcaccgtatccaagggcttctttgaggga
gccattgcagcaaagggtaaagcagttcagatggctgcggatttggacatggaggcagct
ggaggcgagggctggggagacgatgctgagctcaccatggatgaagacggcttcattgat
gcccaggatggattaggagatgagggattggggaaagaggaaggaggaggctgggatatt
gacgaagaagtggaacttcctccagagctggacgttcctctgggagcaggagggtcaaca
gaagatggattctttgtgccgccaaccaagggcatgagtccagcccaaatgtggtgcaac
aactcacagctgccagtcgaccacatcctggctggatcctttgaaacctctatgagactg
ctccacgaccaggttggagttgtgaactttgccccctacaagtcgctgttcatgcagact
ctgtctagaggtcgaacctcttacctggggctgccgtctctaccttgtctgcgcggtcac
cctcagaggaactggaaggactgtggggcgaagcagggactgcctgctgtggggctgcgc
ctctccgacctgatctctcgcctccagcagtgctaccagttgaccacggctgggaggttc
gaggaagccgtcgagcgcttcagagccatcttactttctgttcctctgctggtggtcgat
aataagcaggagatcgcagaggctcagcagctcatcacaatatgcagagagtacatcgtg
ggtctgaccatggaggttgagaggaagaagttgcctaaagaaactttggatcaacagaag
aggctttgtgagatggctgcatatttcacccactgcaacctgcagccggtccacatggtt
ctggtgctgcgcacagctctgaatctcttctttaaactccgcaattttaaaacagctgca
ggatttgcgcggcgcctcctggagctcggcccgaagccagatgttgcacagcagacccgt
aaaatcctggcggcttgtgagaaaaccctgaccgacacccatcagctgaactatgacccc
cacaatccgtttgatctgtgcgctgcctcctttgttcctctctaccgaggacgtcccgtt
gagaagtgccccctctctggagcctgctactgccctccgtacaaaggccagatctgcagg
gtcactcaggtgacggagattggcaaggatgtgatcggtctgcgtgtgagcccactccag
ttccgctaa
DBGET
integrated database retrieval system
