Xiphophorus maculatus (southern platyfish): 102231417
Help
Entry
102231417 CDS
T02923
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102231417 (smc5)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102231417 (smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
AAA_13
AAA_29
Nuf2_DHR10-like
DUF8567
AAA_16
Motif
Other DBs
NCBI-GeneID:
102231417
NCBI-ProteinID:
XP_023191295
Ensembl:
ENSXMAG00000010404
UniProt:
M4A7J8
LinkDB
All DBs
Position
1:complement(14141660..14153600)
Genome browser
AA seq
1073 aa
AA seq
DB search
MAEPSKRQRLSLVSSGSQTVSASSSRGPEGAGEAGSFVEGSILRITMKSFLTYDYSVVRP
GPNLNMIVGANGTGKSSIVCAICLVLAGRTVTLGRGDKVGLYVKRGCQKGFVEIELFKNG
GNLVISREIHVENNQSLWMINGGISNQKKVEEEVKALQIQVSNLCQFLPQEKVGEFAKMS
KIELLEATEKSVGPPEMYEYHCELKNFRNKERELENVVKEKASFLEKAKQRNERNKIDVN
RYYEKKRHLDVIELLEKKKPWVEYETARKELEGLKMEREEAKKQLSALRQAQAPMLKKIQ
QIDDQLKPNESQMKAKTAAIKEASVKCKQKQDQLDRKHKEIDDIKQNLRLKQTEEEDHQK
RINNTRLTIEDLKLELAKISDQPDVTPQINAVNMELRRIQVERAKIEGERADLRREGDNI
SAESKMLVRKLKDMNNIMNAKEEKLRGRHKDTHAALQWLRKNRELFEGNVHEPMMLVVNV
KNPEFAKYVESHISFHDLRAFVFQRKNDMEKFMTEVRDKMNLKVNSISAPPESCSKRAPS
RNIESLRRFGFFTYLREMFDAPDEVMSYLCFQYKVHDVPVGNEQTKALIKTVIEEPYLRV
LYTTDERYNVKRSFYSNKISTSNSALHASQYLSITVDAEEKRQVEQQMKACESRLREIDE
QMKALEKEAAALDRKENELLSEKKRLSELKGKRRQLEQKISTKQDSLKQMEQNVVDLKKV
EEETKEKIKAVNFLKVTIATAIVAQMKLRAKLTMEKVHLALEMAGLTAEKNKLENDCRDS
ASEFKTMEQRCSRLELRKLQLTEQCKGLLKRAKSNCRMQPDEALSEDLRHAFSKLPDTLD
EVDAMLNEERSRAECFTGLSESVVEEYNRREQEIKHLEKELQNKTDSLNAYRQNISEAKE
RWLNPLKQLVEQINDKFSDFFRSMECAGEVDLHSENEEEYDKYGIRIRVKFHSSTQLHEL
TPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTACKETT
SQYFFITPKLLQNLQYAEEMTILCIHNGPHMLPPNEWDTAAFILRRRQRKARA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccagtaaaagacagcggcttagcctcgtctccagcggctcacaaacggtt
tctgcgagctcatccaggggccccgaaggagcaggagaggctggctccttcgtggagggc
tccatacttcgcatcacgatgaaaagcttcctgacatacgactactctgtggtgcgtcct
gggccaaatctgaacatgattgttggagccaacggaaccggaaagtccagcattgtgtgc
gccatatgcctggttctggctggccggactgtaactctgggcagaggagacaaggttggg
ctttatgtgaaacgtggctgtcaaaaaggttttgttgagatagagctgtttaaaaatgga
ggtaatttggtaattagccgagagatccatgtggagaacaatcagtcgctgtggatgata
aatggtggaatcagcaaccagaaaaaagtggaggaggaggtgaaagctctccagatccaa
gtcagcaacctctgccagtttctacctcaggaaaaagttggagagtttgcaaagatgtcc
aaaattgaacttctcgaggcaactgagaagtcagttgggccaccagaaatgtacgagtac
cactgcgagctcaaaaactttcgcaacaaagagcgagagctggagaatgttgtgaaggag
aaggcgagcttcctagaaaaggccaagcagaggaacgagaggaacaagatcgacgtaaac
cgttattacgaaaagaaaaggcacctggatgtcattgagttgctagaaaagaagaagccg
tgggtggagtatgagaccgcacgtaaggagctggagggcttgaagatggagcgggaagag
gccaaaaagcagctgtctgccctgaggcaggcgcaggcgcccatgttgaagaagatccag
cagattgacgaccagctgaagcccaacgagtcgcaaatgaaggccaagactgcagcaatc
aaagaggcctctgtgaagtgcaaacagaaacaagatcagctggatcggaaacacaaagag
atcgacgacattaaacagaacctgcgactgaagcagaccgaagaggaggaccaccagaag
cggatcaataacaccagactgaccatcgaggacctgaagttggagctggccaaaatcagt
gaccagccggacgtgacgccacagatcaacgccgtcaacatggagctgaggcgcatccag
gtggagagagcaaagatcgaaggagagagggcggacctgcgcagggagggcgacaacatc
agcgccgagtcgaaaatgttggtaaggaagcttaaggacatgaacaacataatgaacgcc
aaagaagagaagctgcgaggacgccacaaggatacacatgctgccctccagtggctgagg
aagaaccgagagctctttgaaggaaatgtccatgaacccatgatgctggtggtgaatgta
aagaatcccgaatttgccaagtatgtggagagccacatctccttccacgacctgcgggcg
ttcgttttccagaggaagaacgacatggagaagtttatgaccgaggtccgtgacaaaatg
aacttgaaagttaactccatttctgctccaccggagtcgtgttccaagcgggcgccatcc
cgaaacatcgagtccctgagacgttttggcttcttcacttacctccgtgagatgtttgat
gctcctgatgaggtgatgagttacctttgcttccagtacaaggtgcacgatgtgccagtg
ggaaacgaacagaccaaagctctcatcaaaacggtgattgaggagccctaccttagggtg
ttatacacaacagatgagaggtacaatgtaaaaaggtccttctattccaacaagataagt
accagcaactcggctttgcacgcctctcagtacctctcaataaccgtggatgctgaggag
aaacggcaagtggagcagcagatgaaggcctgtgagtcaagactgcgagagattgatgag
caaatgaaggccctggaaaaggaggctgccgctctggatcgcaaagaaaacgaactgtta
tcagagaagaaacgtctctctgagctgaaggggaagaggagacaactggaacagaaaatc
agcacaaaacaggacagtctgaagcagatggagcagaatgttgtcgatctgaaaaaagtt
gaagaggaaactaaagaaaaaattaaggctgtcaatttcctgaaggtcaccatagctaca
gcaatcgtggctcaaatgaagctgagagccaagctgacgatggagaaggtgcatctggct
ttggagatggcggggttaacagcagagaagaacaagctggaaaacgactgcagggacagt
gcctctgaatttaaaaccatggaacaaagatgcagccgtctggagctgaggaagctccag
ctgactgaacagtgcaaaggcctgctgaagagggcgaagtccaactgtcggatgcagcca
gacgaggcgttatcagaagacctgcgccatgctttcagcaaactgcccgacacgctggat
gaggtcgatgccatgctgaacgaggaacgctccagagccgagtgcttcactggtctcagt
gaaagcgttgttgaggagtacaacaggagagagcaggagatcaaacatctggagaaagag
cttcaaaataagacagactccttgaatgcctacaggcagaatatatctgaggcgaaggaa
cgctggctgaaccctctgaagcagctggtggaacagataaatgacaagttcagtgacttc
ttccgctccatggagtgtgcaggagaggtggatttgcactcagagaatgaggaggaatac
gacaagtacgggattcgcattcgtgtgaagttccacagcagcacgcagcttcacgagctc
acgccgcaccatcagagcggaggagagcgcagcgtctccacaatgctttatctgatggcc
ttgcaggagctgaaccgctgccccttcagagtggtggatgagatcaaccagggaatggat
cctgtaaatgaaaggagagtgtttgacattgtggtccggaccgcctgcaaagagacgacg
tctcagtacttcttcatcacgccaaaactgctgcagaatctgcagtacgccgaggagatg
accattctctgcatccataacgggcctcacatgcttcctcccaacgaatgggacacagcg
gctttcatcctacgccgccgccaaagaaaagccagggcataa
DBGET
integrated database retrieval system
