Xiphophorus maculatus (southern platyfish): 102231433
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Entry
102231433 CDS
T02923
Symbol
rnf220
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102231433 (rnf220)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102231433 (rnf220)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102231433 (rnf220)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
Pox_A_type_inc
zf-Nse
Motif
Other DBs
NCBI-GeneID:
102231433
NCBI-ProteinID:
XP_023190967
Ensembl:
ENSXMAG00000011077
LinkDB
All DBs
Position
6:7347214..7542716
Genome browser
AA seq
681 aa
AA seq
DB search
MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVEKDVHL
PFNNGSYTFASMYHRQGAVPPGFPNRDFPPSLLHLHHQFAPPNLDCSPISMLNHSGVGAF
RPFASPPEDRDGAPGGYQSAFTPAKRLKGCLDAEASPHLRYSDAEGKEYDFGGTQIPQGG
SPSSALKAVEDSGKKIFAVSGLLSDRETSSSPEDRIERCKKKMSLYDSQAPICPICQVLL
RPGELQEHMETEIERLATICLSKNPSSKDGVATPGTPKSMLLSVHIKREGESPVVSPLSS
EDAHHSDRYQTFLRVRANRQTRLNARIGKMKRRKPEEGGQVCPLCSAPLAGSEEEMSRHV
EQCLIQREGALADEDSADMDGENGRGFDEYEWAGQKRIRATALLEGGFRGTGFATCSIKE
SAADSDADLDVDGDDTLEYGKAQYTEADIIPCSGAGEDQGEAREREALRGAVLNGGMPSN
RITPEFSKWANDEMPSTSNGESSKTDPSTPSSSSSSSSNAPRTCKNSEIEKVTEEESTAT
TMEALKARIRELEKQILRGDRYKCLICMRKPALKPGAEIKSIGVWSGSRPLANEVGERQP
KSLPLGLYCLYRGLVIGGYSSSIKRLLPQPLRRDSYTMPLTSIQCWHVHCEECWLRTLGN
KKLCPQCNTITSPGDLRRVYL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccgggcagccttcaagatggagagctcctcctatctgccaaaccctctt
gcttctccagccctcatggtgttggcctctactgctgaagcttcccgtgatgcttcgatt
ccgtgccagcagcctcgcccctttggcgtcccggtctctgttgaaaaggatgtccatttg
ccattcaacaatggttcgtacacctttgcatcaatgtatcaccgtcaaggcgcggtccct
ccaggatttcccaacagggactttcctccgtccctcctccaccttcatcatcagttcgcc
ccgcccaacctggactgctcgcccatcagcatgctgaaccacagcggtgtgggcgccttc
aggccttttgcctcacctccggaagatcgggatggggcaccgggcggttatcaatctgcg
ttcaccccggcaaagcgcctcaagggctgcctggatgcggaagcttcaccccacctgcgt
tactctgatgccgaggggaaagagtatgactttggcggcacccagatccctcagggaggc
tcgcccagtagcgccttgaaagcagttgaggacagcgggaaaaagatcttcgccgtgtcc
ggcctcctgtcagaccgagagacttcctccagcccagaggaccgcattgaacgctgtaaa
aagaagatgtctctatatgacagccaggctcccatttgtccaatttgccaagtgctgctg
aggcccggagagctacaggagcacatggaaaccgaaatagagagactagccacaatctgc
ctcagtaagaacccctcgtccaaggatggcgtagccactccgggaactcccaagtcgatg
cttttgtcagtgcacatcaagagagagggagagtctccggtggtgtcacccctgtcatct
gaagatgcccaccactccgacagatatcagacatttttacgagttcgggcaaacaggcaa
acgagattgaatgctcgtataggcaagatgaagaggaggaagcctgaggagggggggcag
gtatgtccgctgtgcagcgccccattggctgggagcgaggaggagatgagtagacatgtg
gaacaatgcctgatccagcgcgagggggctctggccgacgaagactccgcagacatggac
ggcgagaacgggcggggcttcgacgagtacgaatgggcggggcagaaaaggatcagagct
acggccttactggagggaggcttcagaggaactggattcgccacatgcagtatcaaggag
agcgcggcggacagtgacgctgaccttgacgtggacggagacgacacgttggagtacggg
aaggcccagtacactgaggccgacatcatcccctgctccggagccggggaggaccaagga
gaagcccgggagagggaggcgctacgaggagctgtgctcaacggcgggatgccttccaac
agaataacgcccgagttctccaagtgggcaaacgatgagatgccttcaacgagcaacggg
gagagcagcaagacagaccccagcactccttcatcatcatcctcctcctcctcaaatgct
ccacgtacctgtaaaaacagcgagatcgaaaaggtgacagaggaagaatcaacagctacc
actatggaggctctgaaggcccgaatccgagagttggagaagcagatccttcggggagac
cggtacaagtgtctcatctgcatgagaaagcctgctctcaagccaggcgcagagatcaag
agcataggggtgtggtcgggctcccggccactggccaacgaggttggagagaggcaacct
aagtccctccccctcggcctgtactgcctgtacaggggccttgtgattgggggctacagc
agcagcataaagaggctcctcccacaacccctacggagggactcgtacacgatgcctctg
acgtccatccagtgttggcacgtccattgtgaagagtgctggctcaggactctggggaac
aagaagctgtgcccgcagtgcaataccatcacctcacctggagacctgaggcgtgtctac
ttgtaa
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integrated database retrieval system
