KEGG   Xiphophorus maculatus (southern platyfish): 102231454
Entry
102231454         CDS       T02923                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102231454 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102231454 (kdm5c)
Enzymes [BR:xma01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102231454 (kdm5c)
Protein phosphatases and associated proteins [BR:xma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102231454 (kdm5c)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102231454 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHDvar_NSD Neuromodulin DUF3829_2nd
Other DBs
NCBI-GeneID: 102231454
NCBI-ProteinID: XP_014328662
Ensembl: ENSXMAG00000018246
UniProt: A0A3B5QWV4
LinkDB
Position
1:complement(24569225..24599571)
AA seq 1579 aa
MEVEEFIPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPPDWQPPFSVELEN
FHFTPRIQRLNELEAETRVKLNYLDRIARFWEIQGSSLKIPHIERRILDLYSLSKIVADE
GGFELICKERRWARIAQRLGYPPGKNIGSLLRSHYERIVYPFEMFQSGASLTHCKPKHYD
GEDVDKEYKPHSIPLRQSVPPSKMNSYGRRANRCQPDGPEDLAPHPLTTGSQLISAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARDKGFKKKDDLPQTVTIKDATLPASNDAHGD
APIKPEHLDPEEKQTDEGSSNLQLPPLTVTVKTEVKKEEVKAEYGEDDGSKMTMRLRRNI
TNPQCVDSFICRMCGRGDDDEKLLQCDSCDENYHTYCLLPPLTDPPKSKWRCPKCVAEEC
KKPSEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEREFWRLVSSIEEDV
TVEYGADIHSKEFGSGFPMNNGKKELTKEEEEYARSGWNLNVMPVLEQSLLCHINGDISG
MKVPWLYVGMVFSTFCWHIEDHWSYSINYLHWGEPKTWYGVPSAAAEQLEDVMKKLTPEL
FEYQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN
FCTADWLPAGRHCIEHYRRLRRYCVFSHEELTCKMAACPEKLDLNLAAATHREMFIIVQE
ERKLRKNLMERGITEAEREAFELLPDDERQCDKCKTTCFLSALACSNCPERLVCLYHTQD
LCNCPTEKLYLRYRYTLDELLAMLHRLKVRSESFDSWANRVKEALEQEEGHKIEILDLEK
LKTEAAEKRFPDNELLRKLNAVFKDIAFCHQKSAELLSNTKTGDDRMTLAELKSLVEKMQ
NLPCVIKHLKEVQVVLQTVEDFRKQAQVLVNNKDWRKESPPPEQLQSLLEDGGKLPVVVP
ECNLLQGLKAQGHWLEEVRHTLGTGGGEKHEVTLEVLRNLMEAGCNVAQSVSVETAMAEL
QELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNIEALRGCLTRAQAWV
TDLEEIQNGEHYPCLDDLEGLVAIGRDLPVLMEELRQLELQVTSAHSWRDKATKTFLKKS
SQHSLLEVLCPCVKRRERRTEPEPLDETLDDSDSNTLGLSAQALRDPAAIVLAFKEGEHQ
EKEALLRLQKLNLCKSGLSSASCKENGRWDETMDTDTSYRSEDSVKETRNGSRSATAQSV
CVCAGPPRAPQLRCYLCKDWFHGGCVSFPSLLPPSSPQSNRLCWWDWDTRFLCPQCQRSR
RPRLATILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEALEMPELQRALQELQEL
AEKEEQKEKDAEGNSVIVLSDSEGGEGEDGVIDLTEDSSPIKKTKELDASQAECQNGISK
KSNVTGVESLLPLLPLLKGRVVTLSPGAREQLEKLQLEGDLLEVTLDQTYTIHRVLQAAS
DPPRETLQTLIQIELEEQRGARTSRGRPKDKRKRKGHRGSSADAAGHQPQDASQSKKTCP
LKNSPTRPHSNVEIHPEIL
NT seq 4740 nt   +upstreamnt  +downstreamnt
atggaagtggaagagttcatcccccctccggagtgtcccgtttttgagccatcatgggag
gagttccaggatcccctgggctacatcgccaagatacgtccaatcgcagagaagtctgga
atctgcaaaatccgacctccgccggactggcagcctccgttttcagtggagttggaaaac
tttcactttacccctcgcatccagaggttaaacgaattggaggctgagaccagagtgaag
ctcaactatttggaccgcattgccagattttgggaaattcaaggttcttctttaaaaatc
ccacatatcgaaaggcgcattctggatctgtacagtttgtcaaagattgttgcggatgaa
ggaggctttgagctgatctgtaaggaacgacgatgggctcgtatagcgcaacggctcggc
taccctccagggaagaacatcgggtctttgctgcgctcacattatgagaggattgtctat
ccattcgaaatgttccagtctggcgccagcctgacgcattgcaagccaaagcactatgat
ggagaagatgtggataaggagtacaagcctcactccatcccgctgcgacagtctgtgccg
ccatccaaaatgaacagctacggacgcagagcaaaccggtgccagcctgacggtccagag
gatctggccccccatcctctcaccactggctctcaactcatctctgcgccggaaccaaca
gaggaagacatagagaagaaccccgagctgaagaagctgcagatctatggagccggacca
aagatgatgggacttggacttgtagcaagggacaagggcttcaagaaaaaagatgatctg
cctcagactgttaccatcaaggacgccacacttcctgcttctaacgatgctcatggtgac
gctcccatcaaacctgagcatctcgacccagaagagaagcaaactgatgagggttcatcc
aacctgcagcttcctcctctgactgttacagtcaaaacggaagtaaagaaggaagaagta
aaagcagaatacggagaggatgatggatccaaaatgactatgaggctgagacgaaacatt
accaaccctcagtgtgtggattcttttatctgtcggatgtgtggccggggagatgatgat
gagaaactcctgcagtgcgacagctgtgatgaaaactatcacacgtattgtctcctaccg
ccgctcaccgatcctccaaaaagcaagtggcgatgcccaaagtgtgtcgctgaagagtgt
aagaaaccgtcggaagcctttggctttgagcaagcaacaagagagtacactttgcagagt
tttggagaaatggccgactcgttcaaagccgattacttcaatatgcctgttcatatggtt
cctactgaactcgtggagagggagttctggaggttagtcagcagtattgaagaagacgtg
actgtcgaatatggagcagacattcactccaaagagtttgggagtggctttcctatgaat
aacgggaagaaggagctcacgaaagaagaggaggagtacgcgcgctctggctggaaccta
aacgtgatgcctgttctggagcagtcgctcctctgccatattaatggggacatctctggg
atgaaggtgccttggctttacgtgggcatggtgttttcaacattctgctggcacattgag
gatcactggagctactccatcaactacctgcactggggtgaacccaagacttggtatgga
gttccctctgcggcagctgaacagcttgaagatgttatgaagaagctgactccagagcta
tttgagtaccaacccgacctcctgcaccagctcgtcaccatcatgaaccccaatatcctc
atggctcatggggtaccggtggtacgcactaaccagtgtgccggcgagtttgtgatcaca
tttcctagagcctaccacagtggcttcaatcagggatataactttgctgaagcagtcaac
ttctgcactgcagattggctccctgctggtcgacactgtattgagcattaccgccgcctg
aggaggtattgtgtgttttctcacgaggagctcacctgtaaaatggctgcatgtccagag
aaactggaccttaacctggctgcagctacgcatcgggagatgttcatcatcgttcaagag
gagagaaaactgcgcaagaatctgatggaaaggggcatcacggaagcagagcgagaggct
tttgagctgctgcctgatgatgagagacagtgtgataaatgtaagacgacgtgcttcctc
tccgctctggcctgctccaactgtcccgaacgactcgtgtgtctctatcacactcaggat
ctgtgcaactgccccaccgaaaagctctacctcaggtacagatacaccctagatgagttg
ctggccatgctccatcgattaaaggttaggtcggagtcctttgattcgtgggccaacaga
gtaaaagaggcacttgaacaggaggaaggacacaaaatagaaattcttgacttggagaag
ttgaagacggaagcagcagagaaacggtttcccgacaacgagcttctcaggaaactcaac
gctgttttcaaagacatcgcgttctgccatcagaagagtgccgagctcctcagcaacaca
aagactggtgatgataggatgactttggctgagctgaagtccctggttgagaaaatgcaa
aacttaccatgtgtgattaaacacttaaaggaagtgcaggtggttttgcaaacagttgag
gatttccgaaaacaggcccaagtcctggtcaacaacaaggactggaggaaagagtcgccg
cctcctgagcagctgcagagtctgctggaggacgggggcaagctgcccgtcgtggtgccc
gagtgtaatttactccagggcctaaaggcgcagggccactggctggaggaggtgaggcac
acgctgggcacaggaggaggggagaagcacgaggtgacgctggaggtgctgaggaacctc
atggaggcaggctgcaacgtggctcagagcgtatccgtggagacggccatggcggagctt
caggagctgctcaccatcgccgagcgctgggaggagaaggcacagatctgcctggaacag
aggcagaagcatcctctctccaccctggaggcgatcgtgaacgaggctcagcttattccc
gtcaagctgcccaacatcgaggctctgcggggctgcctgacgcgcgcgcaggcctgggtc
acagacctggaggaaatccagaacggggagcattacccatgtctggacgacctggagggc
ctggtggcgattgggagggacttaccggtcttaatggaggagctgaggcagctggagctg
caggtgaccagcgctcactcctggagggacaaggccaccaaaaccttcctgaagaaaagc
agtcagcacagtttactggaggttttgtgtccgtgtgtgaaaaggagagagcggcggact
gagccggagccgctggacgaaactctggacgactctgattccaacactttgggtctctct
gctcaggcgctgagggacccggcagctatcgttttggctttcaaggaaggggagcaccag
gagaaggaggcgttgctgaggctgcagaaactgaacttgtgtaaatctggactcagctcg
gcgagctgtaaggaaaacgggcgctgggacgagaccatggacacggacacgtcttaccgt
tctgaggactctgtgaaggagaccagaaacggcagccgcagcgccaccgctcagtcggtg
tgcgtgtgcgccgggccgccgcgtgcgcctcagctccgctgctatctgtgcaaggactgg
ttccacggcggctgcgtttcgttcccctccctcctgccgccctccagcccacaaagcaac
cgtctctgctggtgggactgggacacccgctttttgtgccctcagtgtcagcggtcgcgc
cgccctcgtttggccaccatcttggcgttgctggtggcgctccagcggttacccgtgcgc
ctgccggaaggagaggctttgcagtgtctgacggagcgagccatcacctggcagggccgg
gccaaggaggcgctggagatgccggagctgcagcgagcgcttcaggagctgcaggaactc
gcagagaaagaggagcagaaggagaaagacgcagaagggaactcggttatcgtcttatca
gactctgagggaggagaaggagaggacggcgttatcgacttaacggaggacagttcaccc
ataaagaagacaaaggaactcgatgcttcacaggctgagtgtcaaaatggcatcagcaag
aagtcaaatgttacaggcgtggagtctctgctgcccctgctgcctctgctgaaaggccga
gtggtgacgctgtcccccggcgccagggagcagctggagaagctgcagctggaaggagac
ctgctggaggtcaccttggaccagacgtacaccatccacagagtcctgcaggccgcctcc
gaccctcccagagaaactctgcagacgctcattcagatcgagcttgaggagcagaggggg
gcgaggacgagccgcggacgacccaaggacaaaaggaagagaaagggtcaccgaggcagc
agcgcggacgcagcagggcatcaaccccaggacgcctcccagtcgaagaaaacctgccct
ctgaaaaacagcccaactcgtcctcactcaaacgtcgaaatccatccagagattttgtga

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