Xiphophorus maculatus (southern platyfish): 102231516
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Entry
102231516 CDS
T02923
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102231516 (chd1l)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102231516 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
LIG3_BRCT
DEAD
Selenoprotein_S
AAA_34
BRCT_2
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
102231516
NCBI-ProteinID:
XP_005804471
Ensembl:
ENSXMAG00000015898
UniProt:
A0A3B5RAT1
LinkDB
All DBs
Position
9:complement(24395188..24417846)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSDILGKIRNTITEKKKTALSQRDLQTFGLRGIQLRAYQLDGVQWLTQSLSDQQGCILGD
EMGLGKTCQTISLLVYESGALGKKGPFLVLSPLSVMENWRKELESFAPSLTVLCYKGDKE
RRAEIQREKTAQDFQVLLTTYELCLKDASFLKRWRWEVLVVDEAHRLKNQNSLLHKTLTE
FSVGFRLLLTGTPVQNNLQELYSLLSFIQPSVFTPEEADNFVSSYSDVRSRPALASELQS
ILEPFLLRRVKSEVAFDLPKKTELVVYHGMSALQKKYYKAILMRDYDAFVNEQGSKNRLL
NILVNLRKCVDHPYLFDGVEPEPFQIGDHLIEASGKLCLLDSILAFLHAGGHRVLLFSQM
TRMLDILQDYMEYRGYSYERMDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGLNLTA
ADTVIFVDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAVSKLQLTNT
VIEEGRFSLLDQAQSAAAGLQLSEILKFGVDKLLSSDESSIQEVRLEKILGPSQDGQWVD
DDDGFSPLEEEVENESDSDEQNHMYFFEGKDYSKDPSSEDQRSFDRILEEQMAEFQKAAG
EGRALRRKAGSSLSVAFAIPARKRKPLTEAELELRRQRRQEAAAKRAKMMEDKKRQEEEE
KRRKKMAWWESCGYKSLCLQLVDSEEEEEDEEEEEDDISVCSTDSTSTDIRYVLGDVTHP
HTARGDAIIVHCVDDSGRWGRGGLFTALEVRSDEPRKRYELAGKMKDFELGNVLLFPIDD
KQSRLDGRDQLALIVAQKRDKANNLSGILLGALDEGLKKIYSAAKKTNASVHLPRIGHST
KGFNWYGTERLIRKHLASRGIPTFIYYHSRAVKKTVSHQTPAPSAAASNQAPLPSTEGPT
DETEPGPSALPRSFSPAELPSFMKGVRVFFYNIPASERKRLARYLITYDGDEEDVMSEEV
THIVAEVENHIQIQELLDLVHKNQQAVPVKTAWLESCFSKQQQVKTAHFQHQL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatattggggaaaataagaaacaccataaccgagaaaaagaagacggctctc
agtcagcgcgacctgcagacgtttggtttacgagggatacagctgagagcctaccagctg
gacggggtgcagtggctgacccagagcctcagcgaccagcagggctgcatcttaggggat
gagatgggtttgggtaaaacctgccagaccatctctctgctggtgtacgagtcaggagct
ctggggaagaaaggtccgtttctggtgctgagccccctgtctgtcatggagaactggaga
aaggagttggaaagctttgccccgtctctgactgtgctgtgctacaaaggagacaaagag
agacgggctgagattcagagggaaaaaaccgctcaggacttccaggttctgctcaccacg
tacgagctgtgcctcaaagatgcatcgttcttgaaaaggtggaggtgggaggtgctcgtt
gtggacgaagctcaccggctgaagaaccaaaactctctgctgcacaaaaccttgacagag
ttttcagttggtttcagactcctgctcacagggactcccgttcagaacaacctgcaggag
ctctactccctgctgagcttcattcagcccagcgtcttcacaccggaagaggctgacaac
tttgtcagctcctactccgatgtgcgaagtcgacctgctctggcttcagagcttcaaagc
atcttggagccttttctgctccgtagagtaaagtcagaggtggcttttgatctgcccaag
aagacagagctggtggtgtaccacggcatgtcagctttgcagaagaaatactacaaagcc
attctaatgcgggattatgacgcttttgtaaacgagcaaggcagcaagaacagacttctg
aacatcttggtgaatttgagaaagtgcgtcgaccacccatacctgtttgacggggtggaa
ccggagcccttccagatcggggatcacctcatcgaagccagtggaaagctgtgcctgctg
gacagcatcctggcctttctacacgcagggggccaccgtgtcctgttgttctctcagatg
acgaggatgctggacatccttcaggactacatggagtacagaggttacagctacgaacgc
atggatgggtcggttcgaggcgaagagcgaaaccttgctgtgaagaacttcagcagcaaa
gatatctttgtgtttttgctcagcactaaagcaggcggagttggcctcaaccttacagct
gctgacactgttattttcgtggacagtgacttcaacccccaaaacgacctgcaggccgcg
gcgcgctgccatcggattggccagaacaggcctgtgaaagtgatccgcctccttgcgaga
gacaccgtggaggagatcatgtactctcgagccgtatccaagctgcagctcaccaacact
gttattgaagagggccgcttctctttgctggatcaggcgcagtcagctgcggcgggtctg
cagctgagcgagatcttgaagttcggagtagataagcttttatcgtcggacgagagctcg
atacaggaagtcagactggagaagatactgggcccgtcacaggatggtcagtgggtggat
gatgatgatggattctcaccactagaagaagaggtggagaacgagtctgattccgatgag
cagaatcacatgtacttctttgaggggaaagactacagtaaggacccgagctcagaggac
cagaggagctttgaccggatcctggaagagcagatggccgagtttcagaaagcggcagga
gagggacgagctctgcggcgcaaagctggatcttcgctttcagtcgcgtttgcgattcca
gcgaggaagaggaaacctctcactgaggcagagctggagctccggcggcagaggaggcag
gaggctgcagccaagagagccaagatgatggaggacaaaaagaggcaggaggaagaggag
aagcgcaggaaaaaaatggcctggtgggagtcctgtggctataagtcactttgcctgcag
cttgtagacagtgaagaagaggaggaagacgaagaggaggaagaggatgacatcagcgtg
tgctctacagactcaacctccacggatatccgctacgttctgggggatgttactcatccc
cacactgcgaggggagatgctatcatcgtccactgtgttgatgactcagggcggtggggc
agaggaggcctgttcacggcgctggaggtgagatcagatgagccacgaaagcggtacgag
ttggcagggaaaatgaaagatttcgagctgggaaatgtgctcctcttccccatcgacgac
aaacagtcgagactggacggccgagatcagttagccctgatagtggcacagaaaagagac
aaagccaacaacctgtctgggatcctcctcggtgctttggacgaaggactgaagaagatt
tactctgcagctaagaaaaccaacgccagtgttcatcttcctcgcatcggtcactccacc
aaaggtttcaactggtacgggacggagcggctcatcagaaaacacctggcctccaggggc
attcccaccttcatatattaccacagcagagctgtcaagaaaacagtttctcatcagaca
cctgcaccatcagctgctgcttccaatcaagcacctttaccgagcacagagggcccaacg
gatgagacagaacccggcccgtctgctctgccacgcagcttcagccctgcggagctgccc
agcttcatgaagggagtccgagtgtttttctacaacattcccgcatcagaacggaagagg
ttggcccgctaccttatcacgtatgacggagacgaggaggacgtcatgagtgaagaggtc
acacacattgttgcagaggtggagaatcacatccaaatacaggagctgctggatctggtc
cataagaaccagcaggctgttcctgtgaagacggcctggctggagtcctgcttctccaaa
caacaacaagtcaaaactgcacacttccaacatcagctctga
DBGET
integrated database retrieval system
