Xiphophorus maculatus (southern platyfish): 102231540
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Entry
102231540 CDS
T02923
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04621
NOD-like receptor signaling pathway
xma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102231540 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102231540 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xma04054
]
102231540 (nod1)
Pattern recognition receptors [BR:
xma04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102231540 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
CRS1_YhbY
AAA_16
NPHP3_N
AAA_22
ABC_tran
RsgA_GTPase
PIF1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
102231540
NCBI-ProteinID:
XP_005812654
Ensembl:
ENSXMAG00000001359
UniProt:
M3ZGM3
LinkDB
All DBs
Position
3:30637680..30650942
Genome browser
AA seq
941 aa
AA seq
DB search
MGQVEEARVSCLDLLTCHRELLVSTLRSIQCLLDNLLANRFFCEEDVEIVQRTITKPNQV
RKILELVQCKGEDACEYFVFIIYKIRDAYIDLQPWLKETNYKPSGDMEEMKVVNTDPISR
YCEKQRHEMSRDTSFIMSYGQQDETRLEDLYTDTVMELFNDSNESLGFIQSLNQLLGEDG
VVNPQGEIIYVMGDAGVGKSILLQKLQNLWSKRELQTDAIFFFKFRCRMFSIFKEAELMS
LRDLLFKYNCYPDHDPDNEVFDYILRFPDKVVFTFDGYDEIQEDIDLMNVPEVVSPEDKA
NSLQLLLSLLCGKLLKGSKKILTTRTGIELQSRVIKKKVVLRGFSPDHLKTYIKLQFKEQ
EHRDLVSVQLDASPHLCGLCSTPLFSWIVFKSFRHLHTMHDTFHLPETSITLTDIFLLLS
EVFLSRLATPASPLLKKSTRCTSETFRVGLRPLAGFAKLALQGLERGSFLCSQEEISECG
LTEEDMALGFLRPIREFDASDAPATFEFIHITLQSFLAAFALVLDEQTSGNSILKFFTEC
SRRREPCCLPLAFCTRSFVKPREKRPFSTNEHLQFTNLFLSGLLSKTQASLMGLLVSPVL
LKKKRALLKAYLSSSVKVHLEGLPCHTADGEKKVHVLPHFLWILRCIFETGSKDIAKMTA
KGITASFIKLGYCNVYSGDCTAINFVLQHRQKLLGLDMDNNNISDYGVKQLQPSFCKMTI
VRLCVNNLTDSSIEVLAEELCKHKVVKVLGLYNNNITDAGAKLVAQIIEECPQLAVVKVG
KNKITPVGGRYLAMAVKKSTSIFDLGMWGNSIGDEGAEAFAEALKNHPHLTNLSLAANGI
TSKGGKCLAEALKENTVLRIFWLVQNEMMDDSAPHWAELIQANTGLSHLWFINNRFTAAG
IQHFAEALASNSKLKEICVKGNQLSEEEQKRFESEKRLLFH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggtagaggaagccagagtgtcgtgccttgacctcctcacatgccacagagag
ctgctggtgtccacgctcaggagcatccagtgcctcctggacaacctgctggccaaccgc
ttcttctgcgaggaagacgtggagatcgttcaacgaaccatcaccaaaccaaaccaggtg
cgcaaaatcctggagctggttcagtgcaaaggagaggatgcctgtgaatactttgttttt
atcatatataaaatacgtgacgcatatatagacctgcagccatggttaaaagagaccaac
tacaagccaagcggagacatggaagagatgaaagtggtgaacaccgaccctatcagcagg
tactgtgagaagcagcgacatgagatgagccgagacaccagcttcatcatgtcttatgga
caacaagatgagacccgattggaggatctctacacagacactgtgatggagttgttcaat
gactctaatgaaagccttggcttcatacagagtctgaaccagcttcttggagaagatggg
gtcgttaatccccaaggtgaaatcatctatgtgatgggggatgctggtgttggaaagtcc
atccttctgcaaaagctccagaatctctggtccaaaagggagctgcagacagatgccatc
ttctttttcaagtttcgctgtaggatgttcagcatcttcaaggaagcagagctgatgtcc
ctcagagaccttttattcaaatacaattgttacccagatcatgatccagataatgaagtg
tttgattacatcctgcgcttccctgataaggtcgtatttacttttgatggctatgatgaa
attcaggaggacatagacctgatgaatgttcctgaagttgtgtctccagaagacaaggca
aactccttgcagttgctcctcagcttgctctgtggaaaactacttaagggctccaaaaaa
atactgacgaccagaactgggattgagttgcaaagtcgagtcattaagaagaaagtagtt
ttgcgtggattttctccagaccacctaaagacgtacatcaaactgcagttcaaggaacag
gagcaccgggacctggtgtctgttcagctggacgccagccctcacctctgtggcttgtgt
tccactccactcttcagctggattgtattcaaaagttttcgccacctgcatacgatgcat
gacacctttcatctgcctgaaaccagcatcacgctaacagacatatttcttctgctgtct
gaggtgttcctcagccgcttggccacccccgcttctcccctgctgaagaaaagcacccgc
tgcacctcagagacattcagggtggggctcaggccccttgctgggtttgctaagctggct
ttgcagggtttggagagaggaagttttctgtgcagccaagaggagatcagtgagtgtggt
ctcacagaggaggacatggccctaggtttcctcagacccattcgtgagtttgacgccagt
gatgcccccgccaccttcgagttcatccacatcaccctccagtcgtttttggctgcattt
gctcttgtgttggacgagcagacttctggcaactccatcctcaagttcttcacagaatgc
agccggaggagagaaccctgctgtctccctttagctttctgtaccaggagctttgtgaag
cctcgcgaaaagaggcccttctcaacaaacgagcacctgcagttcacaaatctgttcctg
agtggactgctgtcaaagactcaagcaagtctgatgggacttctggtatctcctgtttta
ttgaagaaaaaacgagccttgttgaaggcttacttgtccagtagcgtcaaggtccacctg
gagggcttaccctgtcatactgctgatggagagaagaaagttcacgttttgccccacttt
ctttggatactacgatgcatctttgagacagggagcaaagacattgctaagatgacagca
aaaggcatcacagcaagttttatcaagctgggctactgtaacgtgtactcaggtgactgc
acggccataaactttgtgctgcagcaccgtcagaagctcctggggctcgacatggacaac
aacaatatcagtgactatggggtgaagcagctccagccctcgttttgcaagatgacaatt
gtcagattgtgtgtcaataacctaactgacagcagtattgaggttctggcagaagagctg
tgcaaacacaaggttgtgaaggttttggggctttacaacaacaacatcactgatgctgga
gccaaactggttgctcagatcattgaagaatgccctcagctagcagttgtgaaggtcggt
aaaaacaagatcacacctgtgggtgggaggtatctggccatggcagttaagaagagcact
tccatattcgacttggggatgtggggcaacagcatcggtgatgagggagctgaagctttt
gcagaagctttgaagaatcacccacatctcaccaacctcagcctggcagccaatggcatc
acatccaaaggagggaagtgtctggcagaagcactgaaggagaacacagtcctgaggata
ttctggttggtgcaaaatgagatgatggacgattcagctccacactgggccgagttaatc
caggccaacactggactgagccacctctggttcatcaacaacaggttcacagctgctggg
atccaacactttgctgaagcactagcttccaactccaagctcaaggagatctgcgtgaaa
ggaaaccagctctctgaggaggaacagaagcggtttgagtcagagaaacgactcctgttc
cactga
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