Xiphophorus maculatus (southern platyfish): 102231667
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Entry
102231667 CDS
T02923
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102231667
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xma04031
]
102231667
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
102231667
GTP-binding proteins [BR:
xma04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
102231667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102231667
NCBI-ProteinID:
XP_023188834
Ensembl:
ENSXMAG00000004660
LinkDB
All DBs
Position
5:complement(20812185..20816212)
Genome browser
AA seq
297 aa
AA seq
DB search
MRGMMGTQSSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGSVESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVANSTASGGSGGGSKANSLKRSKSFKTPQSPPMNSSSSSSSSSSKGNCKIS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatgggaactcaaagcagccccgtcaagagctacgattatctcttgaaa
tttcttctcgtgggagacagcgacgtagggaaaggagaaatcctggagagtttgcaggac
ggatctgtcgagtctccatacgcctacagcagcgggattgattacaagaccaccaccatt
ctgctggacggtagacgggtgaaattagagctctgggacacatctggccaagggagattc
tgcaccatcttcaggtcttactctcgtggagcacagggcatccttcttgtatatgacatc
accaacggctggtcgtttgatgggatcgatcgatggatccgggaaattgatgagcatgct
cccggcgttcccaggatccttgtaggaaaccgacttcacctggctttcaagcgccaagtg
ccgacagagcaggcgagggcttacgccgaaaagaacagcatgaccttcttcgaggtcagc
cctctctgcaacttcaacgtcatcgagtcgttcacagagctgtcgcgtatcgtgttgatg
aggcacggcatggagaaattctggaggcccaacagagtcttcagccttcaggatttgtgc
tgccgatcgatcgtctcctgcacgccggtccacctcatcgacaagctgccacttcctgtc
gccatcaaatcccacctcaagtccttctccatggccaacggcatgaacgccgtcatgatg
cacggacgctcgtactcggtcgccaacagcacggcgtctggtggcagcggtggcggaagc
aaagccaacagcctgaaacgctcaaagtccttcaaaactccacagagtcctccgatgaac
tcgtcctcctcttcttcatcctcctcctctaaaggcaactgtaagatctcatag
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integrated database retrieval system
