Xiphophorus maculatus (southern platyfish): 102231761
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Entry
102231761 CDS
T02923
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102231761
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102231761
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102231761
NCBI-ProteinID:
XP_005799559
Ensembl:
ENSXMAG00000019515
UniProt:
M4AYL9
LinkDB
All DBs
Position
23:7288492..7290470
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AA seq
300 aa
AA seq
DB search
MYNMMETEIKTPLPQSNSGSAPGAKNNSASDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGSNAVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTTSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagaccccgctcccgcagtccaactcgggctcg
gcgccgggcgcaaagaacaacagcgccagcgaccaggagcgggtgaagcggccgatgaac
gccttcatggtctggtccaggggccagcggaggaagatggctcaagaaaaccccaaaatg
cacaactctgaaataagcaagcggctcggtgctgactggaaacttctgaccgacgccgag
aaaaggccgttcattgacgaggccaagcgtctacgggcgatgcacatgaaggagcacccg
gattataaataccggccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ctgcctgggggactgctggcgccaggatccaacgccgtcaacaactcggtgtcggtgggc
cagaggatggacggatacgcgcacatgaacggctggacaaacagcgcgtactccctgatg
caggaccagctggcctaccctcaacatcacagcatgaacagcccgcagatccagcagatg
caccggtacgagatggccggccttcagtacccgatgatgtcctcggcgcagacctacatg
aacgcggcgtccacctacagcatgtccccggcgtacacgcaacagaccaccagcgccatg
gggctgagttccatggcgtccgtgtgtaagacggagccgagctcgccgccgccggccatc
acgtcccactctcagcgggcgtgcttgggggacctgagggacatgatcagcatgtacctg
ccccccggcggggacagcgcggagcattcctccctgcagagcagccggttacacagcgtc
catccacactatcagaccgcagggactggcgtcaacgggacgctacctctcacccacatc
tga
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