Xiphophorus maculatus (southern platyfish): 102231792
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Entry
102231792 CDS
T02923
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma00260
Glycine, serine and threonine metabolism
xma00630
Glyoxylate and dicarboxylate metabolism
xma00670
One carbon pool by folate
xma01100
Metabolic pathways
xma01200
Carbon metabolism
xma01230
Biosynthesis of amino acids
xma01240
Biosynthesis of cofactors
xma04981
Folate transport and metabolism
Module
xma_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102231792 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102231792 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102231792 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
102231792 (shmt1)
Enzymes [BR:
xma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102231792 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
102231792
NCBI-ProteinID:
XP_005808867
Ensembl:
ENSXMAG00000003644
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Position
16:complement(19131242..19139142)
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AA seq
482 aa
AA seq
DB search
MSLTNGHSVGKETWDSHNKMMLEPLSVSDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAFGLNSEKWGVNAQPYSGS
PANFAVYAAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDKLQENARLFHPKLIIAGTSCYSRNLDYGRLQQIASENGAYLMGDMAHISGLVAAGVV
PSPFDHCDIVTTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQALTPEFKAYQLQVLANCKALSSSLMDLGYKIVTGGSDNHLILLD
LRNKGTDGGRAEKVLEACAVACNKNTCPGDKSALRPSGLRFGSPALTSRGMVEEDFKKVA
HFIHRGIELTLEVQRSLDPKANLKEFVQALAQGEKFQQRVSEVRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacaaacggtcacagcgtgggaaaagaaacatgggactcccacaacaagatg
atgctggagcctctgtccgtcagcgactcagaggtgttctccatcataaagaaggagaag
cacaggcagacgtacggactggagctgatcgcttcggagaacttcgccagcagagcggtt
cttgaagctctcggttcctgcatgaacaacaagtactctgagggttaccccggccagcgg
tactatggcggaactgaacatgtcgatgagctggaaaggctttgccagaagagggcgctg
gaggcctttggtctgaactctgagaagtggggagttaatgcacagccgtactcaggttcc
ccggccaactttgcggtctacgccgctgtggtggaaccgcacggccggatcatgggcctg
gaccttcccgacggcggccacctcactcatggcttcatgaccgagaagaagaaaatctca
gcaacgtccatcttctttgaatccatgccctataaggtgaacccagaaaccggctacatt
gattatgacaaactgcaggaaaacgcccggctgttccacccaaagctcatcatcgcagga
acaagctgctattcccgtaaccttgactacggccgcttgcagcagatcgccagcgagaac
ggcgcctatctgatgggggacatggctcacatcagtgggctggtggcagccggggtcgtg
ccctcgccctttgatcactgtgacatcgtcacgacgacgactcacaaaactctccgcggc
tgccgtgccgggctcatcttctatcggaaaggggtacggagtgtggacgccaaaggcaaa
gagacgctgtacaacttggagtctttgatcaaccaggctgtgtttccagggctgcaggga
gggccacacaaccacgctattgcaggtgttgccgtggctctgaaacaagccttgactcca
gagtttaaggcttaccagctgcaggttcttgctaactgcaaagctctgtccagctccctc
atggacctcggctacaagatcgtcactggcggttctgacaaccatttaatcctgctggac
cttcgcaacaaaggaacggacggaggacgagctgagaaggtcttggaggcctgcgccgtc
gcctgcaacaagaacacctgtccaggcgataagagtgctctgcgtccaagcggtctgagg
tttggctctccggctctgacctccagaggaatggtagaggaagacttcaagaaggtggcc
cacttcattcatagaggcattgagctgactttggaagtgcagagaagtctggaccccaag
gccaacctgaaggagttcgtccaggcgctggctcagggagagaagttccagcagcgggtg
tcagaggtcagggcggaggtggaggccttcgccgggcagttccccatgccgggccttcct
gaactgtag
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