Xiphophorus maculatus (southern platyfish): 102231880
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Entry
102231880 CDS
T02923
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102231880 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102231880 (sart1)
04121 Ubiquitin system [BR:
xma04121
]
102231880 (sart1)
Spliceosome [BR:
xma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102231880 (sart1)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102231880 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
102231880
NCBI-ProteinID:
XP_005809434
Ensembl:
ENSXMAG00000019724
LinkDB
All DBs
Position
5:complement(29692618..29695572)
Genome browser
AA seq
771 aa
AA seq
DB search
MGSSKKHKEKSRDKDAEDRRREHKKHRHKERERDVSDRDKDRRKRSRSREKSRRESHSKA
ERGPAEPRVKREKVDPGYEESGAEIQPQSTSGDGSLSIEETNKLRAKLGLKPLELNEGKK
ELGTKEAPMVAETINPVLIRQQKEMREKLAAMKEKRLLNQKLGKVKAIGDDDWLDDTAGW
VERSRTLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFVQSKRDSYSSQDLKGLKVQHKV
DSFTEGQTVVLTLQDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEESVD
DMVTFKPHTVLSKYDEEIEGEKKKSFRLGNWGFADGERERELQAMKETLRNQAQSLDMPA
LTIASEYYTPQEMVGFKKTKRKVKKIRKKEKVTISDELLDDTRTSDFGSRARGRGRRQAE
EEQQESEEKVKDGGSWPHELPRMSDDIRTAEMDISDEDDYVPPEPAVIEEDEAEQELQKQ
LEKQRKLRQKQLLKDSGEKVAAQIKVLAKGDDDHDPEKKNNIVFNATSEFCRTLGDIPTY
GLSGNREDQEDIMDFEHEEEKDDGGGSDSEIDENIGWSTVNLDEEQQQVDFSTASATILD
EEPIVNSGLAAALKLCTNKGLLDTQMQKVARVKAPKGALPNDNYCIEDKMGFDDKYSRRE
EYRGFTQEFKEKDSYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTEKRMKK
LEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttctaaaaaacacaaggaaaagagccgcgacaaggacgcagaggatcgtcgt
cgcgaacataagaaacatcgtcacaaggagagagaaagagatgtgtcggaccgtgataaa
gacagacgaaaacgctccagatccagagaaaagagcaggcgggagagccacagcaaggcg
gaaagaggccccgcggagccccgagtaaagagggagaaggtggaccctggttatgaggag
agcggcgcggagatccagccccagagcaccagcggagatggttccctcagcatcgaggaa
acaaacaaactgcgcgctaagctgggcctgaagcccctggagctgaacgagggcaaaaag
gagctggggaccaaggaggcgccgatggtggcggagaccatcaaccccgttctgatccga
cagcagaaggagatgcgagagaagctcgccgctatgaaagaaaagcgcctgctcaatcaa
aaactgggtaaagtcaaagcaatcggcgacgatgactggctggacgacacagccggttgg
gtggagagaagcaggacgctggccaaagagaaggagatggcagaaaagagagccaagctc
ctggaagagatggacgaagagtttggagtcagcagcctggtggaggaggagtttgtccaa
agcaagcgggactcttattcctcacaagatctgaagggtctcaaagtgcagcacaaggtg
gactccttcaccgagggccagaccgttgtcctgaccctgcaggacaaaggtgtgctggaa
gaggaggaagatgtgctggtaaacgtgggactggtggacaaggagaaagctgaaaagaat
gtggagctgaagaagaagaagcccgactataaaccctatgaggaagaggagagcgtggac
gacatggtcaccttcaagccgcacactgtgctctcaaagtacgatgaagaaatcgagggc
gagaagaaaaagagcttccggttgggcaactggggctttgcggacggggagcgagagcgc
gagcttcaggcgatgaaagaaactctgcggaatcaggctcagtccctggatatgcccgct
ctcaccatcgcctccgagtactacacgcctcaggagatggtcggcttcaagaagacgaag
cgcaaagtcaaaaagatcaggaagaaagagaaggtgacgatctcagacgaacttctggac
gacacccgcacctccgacttcggctccagggcgcgaggcagaggccgccgacaggcggag
gaggagcaacaggaaagcgaagagaaagttaaagatggcggcagctggccgcatgaactg
ccccgaatgtccgacgacatcaggacggcagagatggatataagcgacgaagatgattac
gttcctcctgagccggctgtgattgaggaggacgaggcggagcaggagctccagaagcag
ctggagaagcagaggaagctgaggcagaagcagctcctcaaagactctggggagaaggtg
gcggcgcagatcaaagtcctggctaaaggcgacgacgaccatgatccagagaagaagaac
aacatcgtcttcaacgccacctcggagttctgcagaactctgggggacattccgacgtac
gggctgtctggaaaccgggaggaccaggaggacatcatggactttgagcacgaagaagaa
aaagacgacggcggaggttcagattctgaaattgacgagaacatcggatggagcaccgtt
aacctggacgaagagcagcaacaggtggacttctccacggcctccgccaccattctggac
gaggagcccatcgttaactccggcctcgcggctgcattgaagctgtgcaccaacaaaggc
ctgctggacacccagatgcagaaggtggcccgcgtcaaggcaccgaaaggggccctgccc
aacgacaactactgcatcgaggacaagatgggattcgacgacaagtacagccgcagagaa
gagtacagaggcttcacgcaggaattcaaggagaaggacagctataagcccgacgtcaag
atcgagtacgtggatgagtccgggcggaagctcacgccgaaggaagctttcagacagctg
tcgcaccgattccacgggaagggttctggaaagatgaagacagagaagaggatgaaaaag
ttggaggaagaggcgctgctgaagaagatgagcagcagcgatactcctctcgggacggtg
gctttgctccaggagaagcagaaatctcagaaaaccccgtacatagtgcttagtgggagt
gggaagagcatgaatgcaaacaacatcactaaatga
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integrated database retrieval system
