Xiphophorus maculatus (southern platyfish): 102231941
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Entry
102231941 CDS
T02923
Symbol
zswim2
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ZSWIM2
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102231941 (zswim2)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102231941 (zswim2)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102231941 (zswim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
SWIM
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
102231941
NCBI-ProteinID:
XP_014325553
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All DBs
Position
24:3108418..3115931
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AA seq
532 aa
AA seq
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MSPSAGQTHKSTVTMPTXRFDCKVLSSHRCGAKQDISAYFLRRSCPNSVRMSRRTGWRNV
PSDTVSSHQDQALGSTVFLLRSFGPTAFLLREDGETATFKVCLGERHTCTCPTFAREQQP
CKHICWLLLRKFRLPREHQYAFQAGLSERQLLEVLQGSHQATASAAETPHESLPGQETGI
ICRKEIQNRDVCPICLEGLLQKKQPVCYCRYGCGNSVHISCMKVWADHQGLSDGREMLRC
PLCRECFSSLQLLQEQAKNAARLFTAAERERAERHLGVVCCSCRVGPVTGTCYRCCLCSS
LYLCETCATQGSHSQHPLATRKTRKEEWTPASEGSSLDPEPQDGSAPAEPPAYVVLERVP
AAVVRRGSRLLDEGMQCRICLRGFGLGQRLRTLPCQHKFHVDCVDQILLRSRSCPLDGYV
IYCQRPTDGKSSPEVASVPQQEDRLKDLFVPGIALLAQNTKPSPACGAPNSEVPMDASSF
SCLAPNTRKKTRGGMAARKAKVHPKDADEETVRDATGDGLELRMTGFSINKQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccctctgccggtcaaacgcacaaatctaccgttaccatgcctacangtcggttc
gactgtaaagttctgtcgtctcatcgttgtggcgcaaaacaggacatttcagcttacttt
ctaagacgttcgtgcccaaacagcgtcaggatgtccaggcgaaccggctggaggaacgtt
cccagcgacacggtgagctcccatcaggaccaagccctcggctccaccgtgttccttctg
cggtccttcggcccgaccgccttcctgctcagggaggacggagagacggccacctttaag
gtgtgcttgggcgagcggcatacgtgcacctgtccgacgttcgccagggagcagcagccg
tgcaaacacatctgctggcttttactgaggaaattccggctacccagagagcaccagtat
gcctttcaggcggggctgtcggagcgccagctgctggaggttctccagggttcacaccag
gctacagcctctgctgctgagaccccccacgagagccttccaggacaagagaccggaatc
atctgccggaaagagattcagaaccgggacgtgtgtcccatctgtctggaggggctgctg
cagaaaaaacagcccgtgtgttactgcaggtacggctgcggtaacagcgtccacatctcc
tgcatgaaggtgtgggctgaccaccagggcctgtcggacggccgggagatgctgcggtgc
cccctgtgcagggagtgcttcagctccctgcagctgctccaggagcaggcaaagaacgcg
gcccggctcttcacggctgctgagagggagcgagcagagagacacctgggagtggtctgc
tgcagctgcagagtgggcccagtcactgggacctgctacagatgctgcctctgcagctct
ctgtatctctgtgagacctgcgcaacgcaaggcagccactcgcagcatcctctagctacg
agaaagaccagaaaagaagagtggactcctgcgtctgagggctcctccttggatccagag
ccacaggatggaagtgctccggcggagcctcctgcttacgtggtgttggagcgtgtcccc
gcggccgtggtgaggcgcggctctcggctgctggatgaggggatgcagtgtcggatctgc
ctgcggggattcggtctgggtcagcggctccgaactcttccctgtcaacacaagtttcac
gtggactgtgtggaccagatcctcctgaggtcacgctcctgtcccctagacggatatgtc
atctactgtcagagaccgacggacgggaagagctctcccgaggtcgcctccgtcccgcag
caggaagaccgcctgaaagacctgtttgtccctgggatagcgctgctcgctcaaaatacc
aaaccctctcctgcgtgtggagctcctaactcggaggtgccgatggacgcctcgtctttt
agttgtctagcgccgaatacccgcaaaaagacccgaggcggcatggccgccaggaaagcc
aaagtgcatccgaaagatgcggacgaggagaccgttagagacgcgacgggagacggcttg
gagctgagaatgaccggattttccataaacaaacaataa
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