Xiphophorus maculatus (southern platyfish): 102232166
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Entry
102232166 CDS
T02923
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
xma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102232166 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
102232166 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102232166 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102232166 (gtf2h3)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102232166 (gtf2h3)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102232166 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
102232166
NCBI-ProteinID:
XP_014323858
UniProt:
M4ASV4
LinkDB
All DBs
Position
12:16897679..16901923
Genome browser
AA seq
300 aa
AA seq
DB search
MASEDELNLLVIVVDVNPIWWGQQGQREPEFTLCKCLDAVMVMGNSHMAMTRTNRLAVIA
SHCQDSHFLYPSKTWKSGDSGGDEISSSRDGKYELLAVANNLIAEEIRNIMAKTEVTGNS
TDTLLAGSLAKALCYIHRVSKELEVGQEMKSRILVIKAADDCALQYMNFMNVIFAAQKQN
ILIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaggatgaattgaatctcctggtcatcgtggttgatgtgaatcccatctgg
tggggtcagcagggtcagcgtgagccagagttcactttgtgcaagtgtctggatgccgtc
atggtgatgggaaattcccatatggcaatgacaaggacaaacaggctggcggttatcgcc
agtcactgtcaagacagtcacttcttgtatcccagtaagacttggaaaagtggggacagt
ggtggggatgaaatttcctccagccgggatggaaaatacgaacttctagctgtcgccaac
aacctcattgctgaagagatcaggaatattatggctaaaactgaagtgacggggaattca
actgacaccctgttggcaggatctcttgccaaagccctctgctatattcacagggtctca
aaagagttagaagttggacaggagatgaagtcaaggatattggtgataaaagcagctgat
gactgcgctctccagtacatgaacttcatgaatgtgatttttgctgcacaaaagcagaac
atcctgatagatgcgtgtgtgctggactcagactcggggctgcttcagcaggcttgtgac
ataacaggaggcttgtacctgaagataccgcagaaagtagccctggctcagtaccttctg
tgggtgttcctgcccgactcggagcagcgctcccagctggtgctgccgccgcctgcccac
gtggactacagagctgcgtgtttctgtcaccgtaacctcatcgaaatcggttatgtctgc
tctgtttgtctgtcgatattctgcaacttcagccctatttgcacaacatgcgagacggcc
tttaaaatccagctacctcagatggtcaaacctaaaaagaagaaattgaagcaagcagct
tga
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