Xiphophorus maculatus (southern platyfish): 102232172
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Entry
102232172 CDS
T02923
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102232172 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102232172 (sf3b3)
03041 Spliceosome [BR:
xma03041
]
102232172 (sf3b3)
03036 Chromosome and associated proteins [BR:
xma03036
]
102232172 (sf3b3)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102232172 (sf3b3)
Spliceosome [BR:
xma03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102232172 (sf3b3)
Complex B
102232172 (sf3b3)
Complex C
U2 SnRNP specific factors
102232172 (sf3b3)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
102232172 (sf3b3)
TFTC complex
102232172 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
102232172
NCBI-ProteinID:
XP_005795857
Ensembl:
ENSXMAG00000006334
UniProt:
A0A3B5R2S6
LinkDB
All DBs
Position
2:4290968..4317017
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNQFEKVHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDEIGDKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRRFVIHPETNNLILIETDHNAYTETTKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLTAGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDMGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVVVNYNIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcaccctgcagcgggccaccggcatcactcatgccattcatgga
aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatcctggaatta
ttgcgtccagatgcgaacacgggaaaggtgcataccctcctcacgatggaagtgttcggc
atcatcaggtccctgatggccttcaggctcacaggaggaactaaagattacattgtcgtg
ggaagcgacagcggccgcatcgtcatcctggagtaccatccgtccaaaaatcagtttgag
aaagttcaccaggaaacatttgggaagagcggctgccggcgcatcgttcccggacagttc
ctggccgtcgacccaaaaggaagagctgtgatgatcggagcgatagagaagcagaagctg
gtctacatcctgaacagagacgccgctgccaggctcaccatctcgtctcctctggaagct
cacaaagcaaacacgcttgtttatcacgtggtcggagtcgacgttggctttgagaatccc
atgtttgcctgcttagaaatggactatgaggaagccgacaacgacccgacaggagaagct
gctgcaaacacacagcagactctgaccttttatgagctggatttgggtctgaaccacgtg
gtccggaagtacagcgaggctttggaggagcatgggaacttcctcatcaccgttcctggt
ggttcggacggacccagcggcgttctgatctgctctgaaaactacatcacctacaagaac
tttggggatcagcccgacatccgctgtcccatcccccgccgcaggaacgacctggacgac
cctgagcgcggcatgatctttgtctgctcagccacccacaaaaccaaatccatgttcttc
ttcctggctcagactgagcagggagacatcttcaaggtcacgctggagaccgatgaagaa
atggtcactgaaatccggctaaaatactttgacacgatccccgtggcaacagccatgtgc
gtcctgaagaccggcttcctgtttgtggcctcagagtttggaaaccattatctctaccaa
attgctcacttgggcgacgacgacgaggagccggagttctcctcggcgatgccgctggag
gagggagacactttcttctttcaacctcggccgctcaaaaacttggtgctggtggacgaa
caagagaacctttcccccatcatgtcctgtcagattgctgatttggccaatgaagacacg
cctcagctctacgtgtcctgtggacggggcccaaggtccacactgagggttcttcgccac
ggactggaggtttcagagatggctgtgtctgagctgcctggtaaccccaacgccgtgtgg
accgtacgccgacacgtggaagatgagttcgacgcttacatcatcgtgtctttcgtcaac
gccacgctggttctgtccatcggagaaaccgtggaggaagtgacagactccgggtttctg
ggaacaacgcccactctgtcctgctccctgctgggcgaagacgcccttgtgcaggtttac
ccagacggcattcgtcatattcgagcagacaagcgtgtgaacgagtggaaaactcctggg
aaaaaaactattgtccgctgcgccgtgaaccagcggcaggtcgtcatcgctttgaccgga
ggagaactcgtctacttcgagatggacccgtctggccagctgaacgaatacacggagcgg
aaggagatgtctgcagacgtggtctgcatgagcctggccaacgtcccgcctggcgagcag
cgctcccgcttcctggctgtgggtctggtggacaacacggttcggatcatctccctggac
ccgtcggactgtctgcagccactgagcatgcaggcgcttcctgctcagccggaaagcttg
tgtatcgtcgagatgggaggcgtcgagaaacaggatgaaatcggagataaaggaaccatc
ggcttcctctacctcaacatcggcctgcagaacggtgttctgctgaggacagtattggac
ccggtaactggtgacctgtcggataccagaacccgatacctggggtcccgtccagtcaag
ctgttcagagtccggatgcagggacaggaggccgttctggccatgtccagccgctcgtgg
ctcagctactcctatcagtcccgcttccatctgacgccgctctcttatgaaacgctggag
tacgcgtccggctttgcctcagagcaatgccctgaaggcatcgtggccatctccaccaac
actctgaggattttggctctggagaaactgggggccgtgttcaaccaggtggcgtttcct
ctgcagtatacgccccggaggtttgtaattcacccggaaaccaacaacctcatcctgata
gagaccgaccacaacgcctacaccgagacgaccaaagctcagaggaagcagcagatggct
gaggagatggtggaggcggctggtgaggatgagcgagagctggctgctgagatggcggcg
gcgttcctgaacgagaacctcccagaagccattttcggcgcgcctaaagccggagcgggt
cagtgggcttccctggtgcgactggttaaccccatccagggctccactctggatcaggtg
cagctggagcagaacgaagctgcctttagtgtggccgtgtgccgcttccctaacaccggc
gatgattggtacgtcctggtgggagtcgccagagacatgatcctcaaccccagatctgtc
ggtggtggcttcatctacacgtatcgcctcaccgccggaggggagaagctggagtttgtg
cacaagactccggtggaggacgtgcctctggccattgcaccgttccagggacgcatcctg
gtcggagtcggaaaactgctgagaatctacgacatgggcaagaagaagctgctgcgcaag
tgtgagaacaagcacgttcccaacctggtgacgggcatctacaccattggccagcgtgtc
attgtgtccgacgttcaggagagcctgttctgggttcgttaccggcgcaacgagaaccaa
ctaatcatcttcgctgacgatacgtacccccgctgggtgacgacggcctgtctgctcgac
tacgacaccatggcttctgccgacaagtttggcaacatcagcatcgtgcgtcttcctccc
aacaccagtgatgatgtggatgaagaccccacaggaaacaaggccctgtgggatcgaggt
ctcctgaacggagcatcacagaaagcggaggttgtggtgaactacaacatcggagagacg
gtgctgtcgctgcagaagaccactctgatccccggagggtcggagtcgctggtgtacacc
acgctgtcggggggcatcggcattctggtgccgttcacgtcacacgaggatcacgacttc
ttccagcatctggagatgcacatgcgctccgagtttcctccgctgtgcggcagagatcac
ctcagcttcagatcctactacttccccgtgaagaatgtgatcgacggcgatctgtgtgag
cagttcaacagcatggatccgcacaagcagaagagcgtggcggaggagctggaccgaacg
ccgcccgaagtctccaagaagctggaggacattcgcacccgttacgctttctaa
DBGET
integrated database retrieval system
