Xiphophorus maculatus (southern platyfish): 102232230
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Entry
102232230 CDS
T02923
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xma02000
]
102232230 (tmc6)
03037 Cilium and associated proteins [BR:
xma03037
]
102232230 (tmc6)
Transporters [BR:
xma02000
]
Other transporters
Pores ion channels [TC:
1
]
102232230 (tmc6)
Cilium and associated proteins [BR:
xma03037
]
Other cilia and associated proteins
Stereociliary proteins
102232230 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3576
Motif
Other DBs
NCBI-GeneID:
102232230
NCBI-ProteinID:
XP_023189062
Ensembl:
ENSXMAG00000000278
LinkDB
All DBs
Position
5:21481911..21502559
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AA seq
829 aa
AA seq
DB search
MAHNVNFDLSHPRVEAGLESPADEEGVHDSFSQLIAEESQKEGPSDAIELQYQQRNPEDK
DRDNVAYLSPSENRRWRIGSDKTGEEDKGRQTDSLLKDSWSSATLKILSSMPSRTIGRSR
GAIISQYYNRTAELRRRTQRRASIKDFSRSARPSIRGYGVEVDTTDSAEKKQERLIQNLQ
NLSAVDRVRLLKEMPLNLSEKKSLRRLTLQMTKQTRSSSNLRCCSYLKFHIILALRHSWY
NCLSFLHSLHLWQMPLKRVSGRFGSGVLSYFLFLKTLLFFNMFLFLVLGSFLVVPQAVYP
PEQLENRKSFTGLELFTGGGYFANTLLYYGYYSNHTLHSCSKNNISSPPKPECDSKSLSY
NMPLAYFFTIGLSFFVTCIILVYSMSKSFGQSFRIDKSNGMLAMKVFCSWDFKVIKRSSV
RLLSENIRTQLKELLGEAHHRHIRSTISDKLVRLVMHGLGWILCIGATAGCVAVIYYFSD
YMHKEQLKSSQNDSGDPELLKEASLLALPVLVSFINLMLPILFQFTAWMEKYNSPSLRTF
VSLSRNLILKVSVLGVLCFHWLKRVAGSADNNKAFKCWESFVGQELYRFLIIDFIFTLLA
TLFGELLWRSFSDKVLKRNRRPGFDIAKNVLDLIYGQTLAWLGLLFAPLLPAVQILKLLL
LFYIKMSSVMMNCQAPSRAYRVSQMTTIFITLLCFPSFLGASVCVTYTMWRLPSSESCGP
FRGNKTMIQAGKQRIVELVKENPNLYFLAEAHTYLVENPLVLFVGATIFLIVIYFQSQVV
DGQRKIIALLQEQIENEGEDKKFLITRLQSVHERKRTPARNLTSQDSGC
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaatgttaactttgacctgagtcaccccagagtggaagctggactggaaagc
ccagcagatgaggaaggggttcatgattcattcagccagctgattgcagaagagagtcag
aaggagggaccgtctgatgccatcgagctgcagtatcagcagaggaatccagaagacaag
gaccgagacaatgtggcgtatttgtcaccctctgagaatcggcggtggaggataggaagt
gataaaactggagaagaggacaaaggaagacaaacggactctctcctcaaggattcctgg
tcttcagccaccctgaagatcctctcctccatgccgagccgcactatcggccgcagccgg
ggagccatcatctctcagtactacaacaggaccgctgagcttcggagacgcacgcagaga
agagcgtccatcaaagacttctctcgctccgccagacccagcatacgaggctacggcgtg
gaggtggacactacagactcagcagagaagaagcaggagcgattgatccaaaacctgcag
aacttgtcggcggttgaccgagtgaggctgctcaaagaaatgcctctgaatttgtctgag
aaaaaaagcctcagaaggttgacgttgcaaatgactaagcaaacacgttccagcagtaat
cttcgctgttgcagttatctgaaatttcacatcattttagccttgaggcacagctggtac
aactgtttatccttcctgcactccctgcacctgtggcaaatgccgctcaagagagtcagc
ggacgcttcggctccggggtcctctcctacttcctgttcctcaagactctcctcttcttc
aacatgttcctttttctggtcttgggttcgttcttggtggttccacaggcagtgtacccc
ccagagcagcttgaaaacagaaagtccttcactggactggagctcttcactggagggggt
tacttcgctaacaccctgctgtactacggatactacagtaaccacacacttcatagctgt
tcgaagaataacatctccagtcccccaaaaccggagtgtgactcaaagtccctgtcctac
aacatgccgcttgcatatttcttcacaatcggactgtccttctttgttacatgcatcatc
cttgtgtacagtatgtcaaagtcgtttggtcagagcttcaggatcgataagtctaacggc
atgttggccatgaaggtcttctgctcgtgggactttaaggtcatcaagagaagctcggtc
aggctgctgtctgaaaacatccgcacccaactcaaggagctgctgggagaagcacatcac
aggcacatcaggagtacaatctcagacaagttggtcagacttgtgatgcatggcctgggt
tggatactctgcattggagctaccgctggatgcgtggctgtgatttactacttctcagat
tatatgcacaaagaacagcttaaaagttcacaaaatgattccggggatccagagttatta
aaagaagccagcctcttggctctgcctgtcctggtctccttcatcaacttgatgttaccg
atcctcttccagttcacagcctggatggagaagtacaattctccatctctgcgcacgttt
gtttcactcagtcgaaacttgatattaaaagtgagcgtgctcggcgtcctctgcttccat
tggttgaaacgggtggctggcagtgccgataataacaaggcattcaagtgctgggagagt
tttgttggtcaggagctttaccgcttcctaatcatcgacttcatcttcactctgctggct
accctgtttggagagctgctttggaggtcattctctgacaaagtgctcaagcgaaacaga
agaccggggtttgatatcgccaagaatgtcctggacctcatctatggacagacgttagcc
tggttgggtcttctcttcgctcctctcctgcctgctgtgcagatcctcaaactgctgctg
ctcttctacattaagatgagcagtgtgatgatgaactgtcaggcccccagcagggcatac
agagtcagccagatgaccaccatcttcatcaccctcctgtgcttcccctccttcctcggt
gcctccgtgtgcgtcacatacaccatgtggaggctcccatcctcagagtcatgcggtcct
ttccgtgggaacaaaaccatgatccaggcggggaaacaaaggattgttgagctggttaaa
gaaaaccccaacttgtactttctggctgaagctcacacctatttggtggaaaatcccctt
gtcctgtttgtgggagcaaccatctttctgatagtcatttacttccagagtcaggtggtg
gacggccaaaggaagatcatcgctttactgcaggagcagatagaaaacgagggagaagac
aaaaagttcctaattacccggcttcagtccgtccatgagcgcaaacggaccccagcgaga
aatctcacaagtcaggactctggatgttaa
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