KEGG   Xiphophorus maculatus (southern platyfish): 102232332
Entry
102232332         CDS       T02923                                 
Symbol
msi1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
  KO
K14411  RNA-binding protein Musashi
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102232332 (msi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102232332 (msi1)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102232332 (msi1)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_PARP14_1 NID
Other DBs
NCBI-GeneID: 102232332
NCBI-ProteinID: XP_023199456
LinkDB
Position
12:complement(27113376..27142305)
AA seq 421 aa
MREGPQRGLREGGGVCPSLHLARSPLCHPGPNPPSSSHSLSACPPARLGPVTHTHPPTHP
PTPAGSHTPRGLGMDTEGSQSSLSAADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVK
ECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKLVTR
TKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC
EIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATY
TSRSYAGITPGYTYQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAVVRGSTP
SRTAGFLGTSSPGPMADLYGTASQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGY
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagagagggaccgcagcggggactgagggaaggaggtggagtctgtcccagcctgcat
ctggcccgctcccctctctgtcaccccgggccaaacccgcccagctcctctcactcgctc
tccgcctgtcctcccgcacggctcggcccggtcacacacacccacccacccacccatcca
cccacaccggcaggctcacacacaccgagaggactcggaatggacacggaagggagccag
agcagcctgtccgccgcggactcccctcacgacccctgcaaaatgtttataggtggactc
agctggcaaactacacaagagggcctgaaggagtacttctgcaagtacggcgaggtgaaa
gagtgtatggtgatgcgagatccggttactaagcgctcgaggggtttcggatttgtcacc
ttcgtcgatcaggccggcgtggacaaagttttggcccaaagcagacatgaactggactcc
aaaacaatcgatccaaaggtggcgttccctcggagagctcagcccaagctggtgactcga
accaagaagatctttgtgggcggcctgtcagtgaacacaaccatcgaagacgtgaagcaa
tactttgatcagtttggcaaggtcgacgacgccatgctcatgttcgacaagaccacaaac
aggcacagagggttcggattcgtgacattcgagaacgaggatgtggtcgagaaggtctgc
gagatccacttccacgagatcaacaacaaaatggtggagtgtaagaaagctcagcccaag
gaggtgatgtctcccaccggctcggccagggggcgctctcgggtgatgccctacgggatg
gacgccttcatgctaggaatcggtatgctgggttatcccggcttccagactgccacttac
accagccggagctacgcgggcatcactcctggatacacctatcagttccctgagttccac
ttagagaggactccccttctgacttcaccccacccccctgagctcacagccattcctctc
acagcgtacggaccaatggcggcggcggcggcagcggcagtcgttagaggttccacccct
tctcgcaccgcaggatttttaggaacgagcagcccgggtccgatggccgacctctacggg
acggccagccaggagtcggctgtcagcagctacctcagcgctgcgagcccggccccgagc
accggcttcagccacagtttggggggccctctgattgccaccgccttcacgaacggctat
cactga

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