Xiphophorus maculatus (southern platyfish): 102232427
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Entry
102232427 CDS
T02923
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A
KO
K16482
centriolar protein POC1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102232427 (poc1a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102232427 (poc1a)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102232427 (poc1a)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102232427 (poc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_HPS5
eIF2A
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_IP5PC_F
PROPPIN
Frtz
Beta-prop_ACSF4
DUF7899
Beta-prop_WDR75_2nd
Cytochrom_D1
Polysacc_deac_1
Motif
Other DBs
NCBI-GeneID:
102232427
NCBI-ProteinID:
XP_014331398
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All DBs
Position
20:13530885..13560359
Genome browser
AA seq
479 aa
AA seq
DB search
MTSALSDPTLERHFKGHRHTVTSVDFSCNMKQIATGSVDSCVMIWNMKPQMRAYRFDGHK
EAVTCVQFSPSGHLVASTSRDKTIRLWVPSMKADSTVFRAHTATVRCVNFSGDGQTMLTS
SDDKTIKLWTVHRQKFLFSFTQHMNWVRCAKFSPDDGLIVSCSDDKTIKLWDKKSRECVH
TFTEHAGYASYVDFHPSGTCIAAASTDTSVKIWDIRTHKMLQHYPVHSGAVNSLSFHPGG
NFLITASSDSTMKILDLVEGKLLYTLHGHQGAVTCVAFSRAGDYFSSGGSDEQVLVWKSN
FDECIESSNGVKSQCKSAASSQSRPASSTAHLHFNSQPPVLNNQTFERAEHLNRPNTQTT
ARTLSFGHSDGHSRGTHSHAHRDAATRSPSTQQTQGSQLPAHQDKGLSDVSDGRVPSSLA
NTLEHIIGQLDVLTQTVSILEQRLTLTEDKLKECLENQMEIGLHLQNRDEGRRWPNQHC
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgcactgtcggatccaacgcttgagagacattttaagggtcatcggcacact
gtgaccagtgtggacttcagctgcaacatgaaacagattgctacaggctctgtggactct
tgtgtgatgatctggaacatgaagcctcagatgcgagcgtatcgctttgatgggcacaaa
gaagctgtcacttgtgttcagttttctccatctggccacctggtagcctccacctctaga
gacaaaactatacgcctttgggtgcccagcatgaaggcagattcaacagtattcagggct
cacacagcgactgtgcgctgtgttaatttctccggtgatggacagactatgctgacatcc
tctgatgacaagaccatcaaactgtggacagtccacagacagaagttcctcttctctttc
acccaacacatgaactgggtccgctgtgctaagttttctccagatgatggtttgattgta
tcatgtagtgacgataaaaccataaaactgtgggacaagaaaagtagagaatgcgttcat
acttttactgagcatgctggttatgcaagctatgtagactttcatcccagtgggacatgc
attgctgcagcaagtactgatacctctgttaagatttgggacatcagaacccacaaaatg
cttcagcattatccagtccacagtggtgctgtgaacagtttgtctttccatcctggtggt
aatttcctaattactgcatccagcgactccacaatgaaaatactggacctggtggaggga
aagctattgtatacactacatggacatcagggtgcagtcacatgtgtggccttttctaga
gcgggggattacttttcatctggaggttctgacgaacaggttttggtgtggaagagcaac
tttgacgaatgtattgaaagcagtaatggtgtcaaatcgcaatgtaaaagtgcagcgagt
tcacagtctcggccagccagttcaacagctcatcttcattttaactcacaaccgcctgtc
ctcaacaaccagaccttcgaaagagccgagcaccttaacagaccaaacactcaaactacg
gctcgcactcttagtttcggccatagtgacggccacagtcgagggactcactcccatgcc
cacagagacgccgccaccaggtcaccctccacccagcagactcagggttcacaactacct
gcacaccaggataaaggcctgtctgatgtttcggatggaagggttccctccagtttagcc
aacaccctggagcacatcataggtcaactggacgttctcactcagacggtttcgatcctc
gagcagcggctgacactgacggaggacaagctcaaggagtgtttggagaaccagatggag
attggactgcatctccaaaatcgagacgaaggaagaaggtggccaaatcaacactgttga
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