Xiphophorus maculatus (southern platyfish): 102232608
Help
Entry
102232608 CDS
T02923
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X3
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102232608 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102232608 (rubcn)
Membrane trafficking [BR:
xma04131
]
Autophagy
Other autophagy associated proteins
Others
102232608 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
Motif
Other DBs
NCBI-GeneID:
102232608
NCBI-ProteinID:
XP_005800384
Ensembl:
ENSXMAG00000005783
UniProt:
M3ZUA9
LinkDB
All DBs
Position
9:complement(11785781..11809611)
Genome browser
AA seq
958 aa
AA seq
DB search
MMEVTAEGEAEERRREQWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILGHR
LKNEQMYYKQRDYWPFVWCVRYISPNLAMHVEQFSHLEPVLSSGVHRAGESHKAERWLLH
SLQVHKLSAQLKPLLRHLGNTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDT
VGLSPLKGSSCLSLLKSQSLCVLPGAGGTWRNADTAPGGDSLNRRLTTSNCSLREAVGAN
HRPANSTAARSVKGNNMSEESINTKYTTSSASSVETPWVIVSRPGDGERGGTPSPGSISV
PHISLSESPSSSVQPEAGDSCDGDSDDGPEYLAIGNLGQRSHRDSRSSIHSSEQDQTKEP
GTQQSSQTSTPPRCSSFSEGQRDPGRGAKGHTRSFSDTGISQKLRNGGGHRKITIIIEDP
VAESASEDSSMKDYSPFSPQRSNTSTPSSLYMESYGPQYSSVPDGMFRKPSKGQSLISYL
SEQDFGSCADLEKENAHFSISESLIAAIELMKYNMLRQEEEGEEEGDSDSEIQQLKQKIR
LRRQQIRRSRLPPYTTSQHHFHSTDSGGSRRSSQDSYQGLSDSGSAEEVEECELQDADIK
RSVSSSGRSFLSSESISPSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEHDAPQK
LLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKIIVAKQNYR
CAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAIVPGRVLRKWDFSKYYVSNFARDL
LSKISGDPLFNPSDINNGLYKKIKSLESVRVLRVQLFHMKNLFKTCRFARGVLDQLDSVP
GHLTEDLHLFSLNDLTAVRNGELAPRLKELLKLGTMHVAGCVLCQAKGFVCEFCNNDKDI
IFPFQLSKCQRCEECHACYHQSCFRTGKDCPRCRRLAERRERMARRNMEEQEDEGGGT
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggttacggcggagggagaggcggaggagcgcaggagggagcaatggaagctg
ctgtccagcctgaagaccacggtggagggcctcgtgtccaccaacaaccccaacgtctgg
tcgcggtacggtggcctgcagaggctgcacaaggacatgaacaacatcctcggtcacaga
ctgaagaacgagcagatgtactacaagcagcgagactactggccctttgtttggtgtgtt
cgctacatcagccccaaccttgccatgcacgttgaacagttcagtcacctggagccggtt
ctgagcagcggggtgcacagagccggtgagagccacaaggccgagcgctggttgctgcac
agcttgcaggttcataagctgtcagctcagctcaaacctctgctcaggcatttgggaaac
acacggaaatattacaacgacgacgccttcctgctgagtgagcctcatgtgacggccatg
tttcagtgtctggaggctgtggagcagaataatcccaaactgctggcccaagtagacact
gttgggctttccccgctgaaaggctcttcgtgcctgagtctgctgaagagccagagcctg
tgtgtgctgccaggggccggggggacctggaggaatgccgacacggcccctggaggagac
tctctgaaccgcagactaaccacctcaaactgctccctgcgagaagcggtcggagccaac
cacaggccagcaaacagtacagcagctagatccgttaagggcaacaacatgagtgaggaa
agcatcaataccaagtacactacctcttcagccagcagcgtggaaactccgtgggtgatc
gtatccagaccgggggacggtgagcgcggtgggacgccgtctcctggatcaatttccgtc
cctcacatctccctatcagagtccccatcctcctccgttcagcccgaggccggggactcc
tgcgacggtgactccgacgatggaccggagtatctggctatcggtaacctggggcaacgc
agtcatcgtgattctcgaagctccatccacagcagtgagcaggaccagacaaaggaacct
ggcacacagcagagttcccagacctcgaccccgccgaggtgctcgtctttctcagagggc
cagagggatcccggcaggggggccaaaggacacacccgctcgttttcagacacggggatc
agtcaaaaactcaggaatggagggggccacagaaaaatcaccataataatagaggatcca
gtagcagaatcagcaagtgaagactccagcatgaaggactacagtcccttctctcctcag
cgcagcaataccagcacacccagctccctttacatggagtcctatgggccccagtacagc
agtgtgccggatgggatgttcaggaagccatcgaaggggcagagcctcatcagctatctg
tcagagcaggactttggcagctgtgctgacctagaaaaggaaaatgctcatttcagcatc
tcagagtccctcatcgccgccattgagctgatgaaatacaacatgctgcgccaggaggaa
gagggtgaggaggagggagacagcgactccgagattcagcagctcaaacaaaagatccgt
ctgaggaggcagcagatccgccgcagccgtctgccaccctacacaacctcccagcaccat
ttccactccactgacagcggaggctccaggaggagctctcaggactcctaccagggcctg
tctgactccggctcggccgaggaggttgaggaatgtgaactgcaagatgcagatataaag
cgcagtgtaagctccagtggcaggtccttcctgagctcagagtccatctctccctccttc
ctccagtctaactcagctgagtcggtggcgatgggtttgctcaggcagttcgagggcatg
cagcttcctgcagcttcagagctcgactggctggttccagagcacgatgctccacagaag
ctgctgcctattcccgactctctgcccatctctcctgatgatggagagcacgcagatatc
tacaagttgaggattcgagttcgaggcaaccttgagtgggcgccgccgagaccacaaatc
atcttcaacattcatcctgcaccaaagaggaagatcattgttgccaagcagaactaccgc
tgtgctgggtgtggcaccagaattgacccagactacatcaagcgactgcgatactgcgag
tacctcggccgctacttctgccagtgctgccacgagaacgcccaggcgatcgttcccggc
cgagttctcagaaagtgggacttcagcaagtactacgtcagcaactttgcccgagacctg
ttgagcaagatttcaggagaccctctgttcaacccgagtgacatcaacaacggcttgtac
aagaagatcaagtctctggagtctgtcagggttttaagagtgcaactttttcacatgaaa
aatctcttcaagacttgtcgctttgccagaggggttcttgaccagttggacagcgtgcca
ggtcacctgaccgaggaccttcaccttttctcgctcaacgatctcactgctgttcgcaac
ggagaactggctcctcggttgaaagagctgcttaagcttggtaccatgcatgtagctggt
tgcgtgttgtgtcaggcgaagggctttgtctgcgagttctgcaacaacgacaaagacatc
atcttccccttccagctcagcaagtgccagcgctgcgaagagtgccacgcctgttaccat
cagagctgcttcaggacaggtaaagactgcccccggtgtaggcggctggcggagcgtcgg
gagaggatggcgcgcagaaacatggaggagcaagaggacgaaggaggagggacttag
DBGET
integrated database retrieval system
