Xiphophorus maculatus (southern platyfish): 102232645
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Entry
102232645 CDS
T02923
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102232645
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102232645
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102232645
Nuclear receptors [BR:
xma03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102232645
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF3135
Motif
Other DBs
NCBI-GeneID:
102232645
NCBI-ProteinID:
XP_023185400
Ensembl:
ENSXMAG00000006999
LinkDB
All DBs
Position
3:17355844..17383101
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AA seq
525 aa
AA seq
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MPAPARALEQPTEVSERARRPIQRCDRSGMEYEESDFLPADTPRKKGGAVSKKTHLTQIE
VIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRCQHCR
LQKCLAQGMSRDAVKFGRMSKRQRDSLIAEVERHRQQQQQQQLQDDTQVELSYPPKNRQD
HSPQLLQPIATPYPYVGDAYGAEVHPYLVYSPSDSQGYRGSGVSPTSRFQGRGDSGGHHD
IRGFDSRQQHQDLMTLHSYSPLDDLYNHYPHSLRNIDELCASIVRSHRETSQYRLEELQA
LRWKVFSREEIQAYQSKTVDEMWQHCAVRLTDAVQYVVEFAKHIPGFRMLSQNDQIALLK
TGSMEVVLVRMCRFFNTENNTVFFDGKFAGTEVFKSLACGDLIAAVFDFAHGMCALKLTE
QQLALFSALVLINADRPSLEDRVRVQRVHRSVEVGLTHILHRDNHDSLLHKLYQRMAVLR
SLCSLHMEKLRWFSQRYPLTAHSLFPPLYKELFASEAELLPGATH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgccggcccgggcgctagagcagccaacagaggtgagtgaaagagcgcgtagg
cccatccagcgctgtgacaggagcggcatggaatatgaggagtcagactttctacctgca
gacacccccaggaaaaaaggaggcgccgtgtccaagaagactcatttgacccagattgaa
gttatcccatgcaagatttgtggcgataagtcttctggagttcattatggagtcatcaca
tgtgaaggctgcaagggctttttccggcgcagccagcttcccaccgtatcctactcctgc
tccaggcagagtaactgtcagatcgaccgggccagccggaaccgctgccagcactgccgc
ttgcagaagtgcttggctcagggcatgagcagagatgctgtgaagtttggccgcatgtcc
aaacgtcagagggactctcttattgctgaagtggagcgacacaggcagcagcagcaacag
cagcagcttcaagacgacacgcaggtggagctgtcctacccacccaaaaaccgccaggac
cactccccacagctccttcagcccatcgccacaccgtacccctacgtcggtgacgcctac
ggcgcagaggtccacccctatctggtttactccccgagcgactcgcaggggtaccggggc
tccggtgtctcccctacgtccagattccaggggcggggggacagcggtggacaccatgat
atcagaggatttgactccagacagcagcatcaggatctcatgactcttcattcctacagt
cctctcgatgacctctacaaccactatccccactctctgcgaaacatagatgagctgtgt
gccagcattgtgcgttcccacagagaaaccagccagtacagactggaggagctgcaggct
ctcagatggaaagtgttcagcagagaggagatccaagcctaccagagcaagacagtggat
gagatgtggcagcactgtgccgtccgactgactgatgctgttcagtatgtggtggagttt
gcaaaacacatcccaggtttccggatgctcagccagaacgaccagatcgcactactcaaa
actggctccatggaggtggttctggtccgaatgtgccgcttcttcaacacagaaaacaac
actgtgttctttgatggaaaatttgctggaactgaagtcttcaagtctctggcgtgcggt
gatttaatcgcagcggtgttcgacttcgctcacggtatgtgtgctctgaaactcacagag
cagcagctcgccctcttcagtgctctggtcctaatcaacgctgaccgtccctctctagag
gacagagtgagagtccaacgagtacacagaagtgtggaggtgggactcactcacattctt
caccgagacaaccacgatagtctgttgcataagctctaccagaggatggcagtgttgcgt
tcgctgtgcagcctgcacatggagaagctgcgctggttcagccaacgatacccgctcact
gctcactctctgttccccccgctctacaaggagctgtttgcgtccgaggccgagctgctg
ccgggggccactcactga
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