Xiphophorus maculatus (southern platyfish): 102232686
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Entry
102232686 CDS
T02923
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04115
p53 signaling pathway
xma04120
Ubiquitin mediated proteolysis
xma04137
Mitophagy - animal
xma04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102232686 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102232686 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102232686 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
102232686 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102232686 (siah1)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102232686 (siah1)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102232686 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
102232686
NCBI-ProteinID:
XP_023208203
Ensembl:
ENSXMAG00000006415
UniProt:
A0A3B5QUJ2
LinkDB
All DBs
Position
2:complement(4441516..4469390)
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AA seq
338 aa
AA seq
DB search
MSVVKSNPSVALHSPPWNSFFRLFPCVAVRNVHSAKEVPTFQDQKKAAFGNLMDEEMSRQ
TATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSN
CRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTEHEELCEFR
PYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSC
FGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIH
EGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgaaatccaatccaagcgtcgctctgcattctccaccctggaattccttc
tttagactcttcccatgcgtagccgtgaggaacgtccactccgctaaagaggtccccaca
tttcaagatcagaagaaagccgcctttggaaatcttatggacgaagaaatgagtcgccag
accgccaccgcgctgcccacaggaacctccaagtgcccgccgtctcagcgcgtgcccacc
ctgtcaggcaccaccgcctccaacagcgacctggccagcctgttcgagtgtcccgtctgc
ttcgactatgtgctgccccccatcctgcagtgtcagtccggacacctggtgtgttccaac
tgccggcccaagctcacctgctgtcccacctgcaggggcccgctgggctccatcaggaac
ctggccatggagaaggtggccaactccgtcctgttcccctgcaagtacgcgtcgtcgggc
tgcgaggtcacgctgccgcacaccgacaagacggagcacgaggagctgtgcgagttccga
ccgtactcctgcccctgtcccggcgcctcctgcaagtggcaggggtcgctggacgccgtc
atgccgcacctgatgcatcagcacaagtccatcaccacgctgcagggcgaggacatcgtg
tttctggcgacggacatcaacctcccgggcgcggtggactgggtcatgatgcagtcctgc
tttggcttccacttcatgctggtcctggagaagcaggagaagtacgacggccaccagcag
ttcttcgctatcgtgcagctcatcgggacgcgcaagcaggccgagaacttcgcctaccgg
ctggagctgaacggccaccggcgccggctcacctgggaggccacgccccgctccatccac
gagggcatcgccaccgccatcatgaacagcgactgcctggtgttcgacacgtcgatcgcg
cagctgttcgccgagaacggaaacctgggcatcaacgtcaccatctccatgtgctga
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