Xiphophorus maculatus (southern platyfish): 102232712
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Entry
102232712 CDS
T02923
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03030
DNA replication
xma03410
Base excision repair
xma03420
Nucleotide excision repair
xma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102232712 (rfc2)
03410 Base excision repair
102232712 (rfc2)
03420 Nucleotide excision repair
102232712 (rfc2)
03430 Mismatch repair
102232712 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xma03032
]
102232712 (rfc2)
03036 Chromosome and associated proteins [BR:
xma03036
]
102232712 (rfc2)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102232712 (rfc2)
DNA replication proteins [BR:
xma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102232712 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
102232712 (rfc2)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102232712 (rfc2)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102232712 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
102232712 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
Rad17
AAA_11
RuvB_N
nSTAND3
AAA_19
AAA_assoc_2
DEAD
AAA_18
AAA_24
MipZ
AAA_5
ABC_tran
MeaB
AAA_28
AAA_30
DNAX_ATPase_lid
AAA_25
MCM
NTPase_1
SLFN-g3_helicase
RNA_helicase
AAA_2
FtsK_SpoIIIE
bpMoxR
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
102232712
NCBI-ProteinID:
XP_005801970
Ensembl:
ENSXMAG00000008862
UniProt:
A0A3B5QEI6
LinkDB
All DBs
Position
1:30911026..30916313
Genome browser
AA seq
357 aa
AA seq
DB search
MDVEMADRESDQKPSGSGVKTDTEAGESSSKSSGSSYELPWVEKYRPLKLNEIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARTLLGAAMKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYAKLTDGQVLARLQEVVEQERLAISDDGLEAVIFTAQGDMRQALNNLQ
STHSGFGYINSENVFKVCDEPHPLLVKSMLGHCVAGDVDAAYRVVEQLWALGYSPEDIMG
NIFRVCKTFQMAEYLKLEFIKEIGFTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagagatggcagacagggaaagcgaccagaagccgagtggaagcggggtaaag
acggacaccgaggccggggagtcctcgtcgaaaagctccgggagttcctacgagctgccc
tgggtggagaagtaccggccgctgaaactgaatgagatagttgggaacgaggagacggtg
agccgcctggaggtgttcgccagggagggaaacgtcccgaacatcatcatagcaggacct
ccagggacagggaagaccaccagcatcctgtgtttggcccgcactctgctgggggccgcc
atgaaggacgccgtgttggagctcaacgcctccaacgacaggggcatcgatgtggtgaga
aacaagatcaagatgttcgcccagcagaaagtcacgctgcccaaaggtcgacacaagatc
atcatcctagatgaagcggacagcatgacggatggtgctcagcaggcgctcaggaggatc
atggagatctactccaaaacgactcggttcgctctcgcctgcaacgcctccgacaagatc
atcgagccgatccagtcgcgctgcgccgtgctacgctatgccaagctgacggacggccag
gtgctggcccggctgcaggaagtggtggagcaagagcggctggccatatctgacgacggg
ctggaggccgtcatcttcacagcacagggggacatgcggcaggcgctgaacaacctgcag
tccacccactctggctttggctacatcaacagcgagaacgtgttcaaagtgtgcgacgag
ccgcaccccttgctggtgaaaagcatgctgggacactgcgtggcgggggacgtggacgca
gcgtaccgggtggtggagcagctgtgggcgctgggctactcccccgaggacatcatgggg
aacatcttcagggtctgcaagacgttccagatggccgagtacctgaagctggagttcatc
aaggagatcggcttcactcacatgcgagtggctgaaggagtgaactccctgctgcagatg
gccggcctgctgggaagactctgcagcaagacggcgccccctgctgccagctga
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