Xiphophorus maculatus (southern platyfish): 102232794
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Entry
102232794 CDS
T02923
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102232794 (rnf6)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102232794 (rnf6)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102232794 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING-like
zf-RING_4
zf_RING_Vps8_fungal
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102232794
NCBI-ProteinID:
XP_023182470
UniProt:
A0A3B5Q261
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All DBs
Position
21:11124353..11130881
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AA seq
716 aa
AA seq
DB search
MDPPGGGSERRRQAERLRREEAYYNFINELSEEEYRLMRDGNLLGTPGEVTAEELRQRLD
GAKERVSSQPHAEQRSQTADSGEQQSSSSAGEERGAGGRGGAGATEAGADSSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHIDTVNSVD
APELPVTPLNTSARTASPLSSSRPSATPRPAPYPSPRPAIRRIETRRTRSSTTALSVSSA
TLPPAEIVPATNQRRASTLHSSAPSPNVPSPPDDQSAPSQHHVLNVEAEHGRNEMPPTLD
CPRVSPQGDSQPQAAGHESRSSRTRSRGRARRAAAAGGGVSSRASRRSRSPLNRTPSVST
LPPAGSSPNGSTIQTGEPSGVTTSVSMETGGIVSEPDAVLESAVETVERASELPAAGAGS
SAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEASSESVA
PSHADVGATNSSSGRLHLNENEPGQVGTNEVVQGLEGQVRSEDEQIGQARFGGGVVSSID
GRANSRDTNNLVENGTLPILRLAHFFLLNDDEDDEHPRGLTKEQIDNLSTRTYGQASLEG
EMGRACSVCINEYTQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPILAGHHD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggaagtgaacggcggaggcaggctgagcgtcttcgacgggag
gaggcatactacaactttattaatgaactgagtgaagaagagtaccgcctgatgagagat
ggcaatctgctgggcactcctggggaggtgactgcagaggaactccgtcagcgcctggac
ggagccaaagagcgggtgtcgtctcagccccatgctgagcagcgatcgcagactgctgat
tctggagaacagcagagcagtagcagcgcaggagaggagagaggggctggaggaagagga
ggggccggggctacagaagctggagccgattcttctaatggtgattcgttactggagtgg
ttgaacacgttcaggcgcaccggtaacgcgactcgaagcggccagagtggtaaccagacg
tggagggctgtcagccggaccaatcccaacagcggggagtttcgtttcagtctcgagatc
aacatcaaccacgatcagcccgagccgggagagcatattgacactgtgaactctgtggat
gccccagaactcccggtgactcctctcaacacctccgcccgcaccgcttcccccctctcc
agctctcggccttcagccactccgaggcctgcgccttacccctccccacgcccggccata
agaaggatcgagacccggcgtacacgcagcagtaccaccgctctatccgtgagctccgcc
acgcttcctcctgcagagatagtcccagccaccaaccagaggcgggcttctactttgcat
tcatcagcaccttctcctaatgtccccagtcctcccgatgatcaaagtgcaccatcgcag
catcatgtcctgaatgtagaggcagagcacgggcgtaatgaaatgcctcctactctagac
tgtcctcgggtgtcgccacagggcgactctcaaccccaagctgcgggacacgaatcacgc
agcagcaggactcgatctcgtggccgagcgcgcagggctgcagcagcagggggcggagtt
tcttctcgcgcatcgaggagaagtcgatcccctttgaacagaacgcctagtgtaagcacc
ctcccaccagctggaagcagtccaaacgggtctacgatccaaactggtgagccgagcggt
gtcacgacctctgtatccatggagaccgggggaattgtgtccgaacccgacgctgtgctg
gagtccgccgtggaaacagtagagcgtgcaagcgagttgcccgcagcaggcgcaggaagc
tcggcggtcagacgccatccaacaatcatgctggacttgcaggtgagaaggatccggcct
ggcgagaacagggaccgggacagcatcgccagcagaactcgatcccgcgcgcgggtcgct
gagaacacggtcacgttcgaaagtgacagcggtgggttccgacgcaccatctcccgctcg
gagcgagccgggatccgcacctacgtcagcaccatccggattccgttgaggcgcatcagc
gagacgggcctcggagaacccaactctaccgccctgcggtccatcttgcgtcagattatg
actggatttggggagcttagctcgctcatggagacggaggcgagttcggaaagcgttgcg
cccagccacgctgacgttggcgctactaatagcagtagcggtcgtttacatttaaatgag
aatgagcctggccaggttgggaccaatgaggtcgttcaagggttggagggccaggtgagg
agcgaggatgagcagattgggcaggccagatttggaggtggagtagttagctccatagat
ggacgggcaaacagccgagacaccaacaacttggttgaaaacggcaccctacccatccta
aggttggcacacttctttttactcaacgacgacgaagacgacgaacatccccgaggcctg
accaaagagcagatcgacaatctatccacgcgtacgtacggtcaggccagccttgaaggt
gagatgggtcgcgcctgcagcgtgtgcatcaacgaatacactcaaggcaacaagctgagg
cgcttgccctgctcccatgagttccacgtccactgcatcgaccgctggctctccgaaaac
aacacctgccccatctgcaggcagccaatcctcgcagggcatcacgactga
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