Xiphophorus maculatus (southern platyfish): 102232822
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Entry
102232822 CDS
T02923
Name
(RefSeq) thrombospondin-4-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04145
Phagosome
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102232822
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102232822
09144 Cellular community - eukaryotes
04510 Focal adhesion
102232822
09142 Cell motility
04820 Cytoskeleton in muscle cells
102232822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102232822
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102232822
00536 Glycosaminoglycan binding proteins [BR:
xma00536
]
102232822
Membrane trafficking [BR:
xma04131
]
Endocytosis
Phagocytosis
Opsonins
102232822
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102232822
Exosomal proteins of colorectal cancer cells
102232822
Exosomal proteins of bladder cancer cells
102232822
Glycosaminoglycan binding proteins [BR:
xma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102232822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
102232822
NCBI-ProteinID:
XP_023196023
Ensembl:
ENSXMAG00000000733
LinkDB
All DBs
Position
9:29457699..29473446
Genome browser
AA seq
748 aa
AA seq
DB search
MLRFVALTCVLCLGGNLVTGQRDGEIISQIKMTNLALAEIKELLKQQVREIVFLKNTVME
CEACGMGGIQPVSPCEPNPCHPGVSCSESPEGPQCGACPDGMEGNGTRCTDVDECKVMPC
HMGVRCINTSPGFRCGSCPAGYTGPQVQGVGLAYATANKQVCKDIDECEGSSNGGCVENS
ACLNTPGSFRCGPCKPGYVGDQRLGCKPERACGNGQPNPCHASAKCIAHREGTIECQCGV
GWAGNGYLCGTDTDIDGFPDEKLNCPDLTCNKDNCLTVPNSGQEDADNDGIGDACDDDAD
GDGIPNTQDNCKLVPNVDQRNIDEDDFGDACDNCRAVKNNDQRDTDLDKLGDECDDDMDG
DGIINVMDNCKRVPNVDQKDRDGDKVGDACDSCPYVPNPDQMDADNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGKGDECDDDDDDDGIPDLLPPGPDNCRLVPNPLQE
DLDGDGVGDVCEKDFDNDTIIDPIDACPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAQQGIQLKAVKSSTGPGENLRNALWHTGDTGDQVKLLWKDPRN
VGWKDKTSYRWFLQHRPADGYIRVRFYEGPQMVADTGVIIDATMRGGRLGVFCFSQENII
WANLRYRCNDTLPGDFDTYRTQQVQLVA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtttgtagcgctgacctgcgtcctctgcttgggaggaaaccttgtaacggga
cagagggatggagaaattatcagtcagattaaaatgacaaacctcgctttggccgagatt
aaagagctgctgaagcaacaggtcagagaaatagtgttcctaaagaacacagtgatggag
tgtgaagcctgtggaatggggggcatccagcccgtctctccctgtgagcccaacccctgc
caccctggtgtgagctgctcagagtcccctgagggcccgcagtgcggagcctgtcctgat
ggcatggagggcaacgggacgcgctgcacggacgtggacgagtgtaaggtgatgccgtgc
cacatgggggtccgctgcatcaacacgtccccgggtttccgctgcggttcctgtcctgca
ggatacaccggacctcaggtccagggggtcggactcgcttacgccactgccaacaaacag
gtgtgcaaagatatagatgagtgtgaaggttccagcaatggtggctgtgtggaaaactct
gcctgtctgaacactcctggctcgttcagatgcggtccctgtaagcccggctatgttggg
gaccaacgccttggctgtaagcctgagagagcctgtgggaacggccagcccaatccctgc
cacgccagcgccaagtgcatcgcccaccgagagggtacaatcgaatgtcagtgtggagtg
ggatgggcaggtaatggatacctgtgtggaacggacaccgacatcgatggtttccctgac
gagaagctgaactgtcctgacctgacctgtaacaaggataactgcctcactgtgccaaac
tccggccaggaggacgctgacaacgatgggattggagacgcctgtgatgacgacgcagat
ggggatgggatcccaaacacacaggataattgcaagctggtgcccaacgttgatcagaga
aacattgatgaggacgactttggtgatgcgtgcgacaactgcagagcggtgaaaaacaac
gaccagagagacacggatctggacaaacttggtgatgaatgcgatgacgatatggatgga
gatggaatcataaatgtcatggacaactgcaaaagggttcccaatgttgaccagaaagac
agagatggagacaaagttggagacgcctgcgacagctgtccctacgttcccaacccggac
cagatggacgcagacaatgacttgattggagatccatgtgacaccaacaaggacagtgat
ggcgacggacaccaagactcccgggacaactgcccggccgtcatcaacagttctcagctg
gacacagacaaagacggaaagggggacgagtgtgatgacgacgatgatgatgatgggatc
cctgacctgctgccgcctggtcccgacaactgccgtctggtgcccaaccctctgcaggag
gacttggatggtgatggtgtgggtgatgtgtgtgagaaggattttgataacgacaccatc
atcgatcccattgatgcctgtcctgaaaatgcagaagtcacccttactgacttcagggag
taccagaccgtcgttctggacccggaaggagacgcacagatagaccccaactgggtggtg
ctgaaccagggaagagaaattgtccagactatgaacagtgaccctggtttggctgttggc
tacactgcgttcagcggtgtggattttgaagggacgtttcatgtaaacacagtaacagac
gacgactacgctgggtttatcttcggctaccaggacagctccagcttctacgtggtgatg
tggaagcaggtggagcagatctactggcaggcgaacccgttcagagccgtggcacagcaa
ggcatccagctcaaggcggtgaagtcgagcacaggtccgggtgagaacctgaggaacgcc
ctgtggcacaccggagacaccggagaccaggtgaagctcctgtggaaagatcctcgcaac
gtgggctggaaggacaaaacgtcgtaccgctggttcctccagcaccgacctgctgatggc
tacatcagagtccgtttctatgagggccctcagatggtggcagacaccggcgtcatcata
gacgccacgatgagaggaggccggctcggcgtcttctgcttctcccaggagaacatcatc
tgggccaacctgcggtaccgctgcaacgacactcttcctggggactttgacacctacaga
acccagcaggttcagctggtggcctga
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integrated database retrieval system
