Xiphophorus maculatus (southern platyfish): 102232828
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Entry
102232828 CDS
T02923
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04136
Autophagy - other
xma04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102232828
04136 Autophagy - other
102232828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102232828
03029 Mitochondrial biogenesis [BR:
xma03029
]
102232828
Membrane trafficking [BR:
xma04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102232828
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102232828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
BCAS3_WD40
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
CNH
WDR55
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
102232828
NCBI-ProteinID:
XP_005809520
Ensembl:
ENSXMAG00000010092
UniProt:
M4A6N1
LinkDB
All DBs
Position
16:complement(23807313..23822093)
Genome browser
AA seq
451 aa
AA seq
DB search
MEGADGAGEPGRRRQFGCASFNQDSTSLALGTRSGYQLFSLTSVEKLDCIHESANTPDVY
IMERLFSSSLVVVVSAAMPQRMNIYHFKKGTEICNYSYPSSILSVKLNRQRLVVFLEESI
YVHNIKDMKLLKTLLDTPSNPSGLCALSTNQSSSYLAYPGSVTSGDIVVHDTNSLSTVAT
IPAHDSPLAALAFNASATKLASASVKGTVIRVFSVPEGERLFEFRRGMKRYVNISSLSFS
SDAQFLCASSNTETVHIFKLEQLGPSAEDEAATWTAYMGKMFSAASSYLPAPVSGMMSQD
RAFATVHLLSSGQRNVCTLVTIQGLLRLLVATADGQLFIYNVDPQDGGECQLAYKHRLVG
VDDETHSGEMKSEGGQLTQETHSSPSYAETAALPASGHATATLTGYSEDGGAKQGDVIPE
HEFAVGPVCLDDENEFPPIRSCRSGTGDGQG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcggacggagcgggcgagccgggccggcgccgccagttcggctgcgcctct
ttcaaccaagactccacgtcactggcgttgggaacaaggagtggctaccagcttttctct
ctgacctcggtggaaaaactggactgcatccatgagagcgcgaacactccggatgtctac
atcatggagcgtctgttctccagcagtctggtggtggtggtgagtgctgccatgccgcag
cggatgaacatctatcacttcaagaaagggacggagatttgtaactacagctaccccagc
agcatcctttccgtcaagctcaacagacagaggctggtggtgttcctcgaggagtccatt
tatgtccacaacattaaagacatgaaacttctcaagactctgctcgacactccgtccaac
ccctcaggtctctgcgctctgtccaccaatcagtccagctcctacctggcgtatcctggc
agcgtcacgtctggggacatcgttgtacatgacaccaacagtttgagcacagtggccacc
atcccggcccatgacagtccgctggcagcgctcgccttcaacgcctcagccactaaactc
gccagcgcctcagtgaaggggactgtgatccgggtcttctctgttcctgaaggcgagcgt
ctatttgagttccgcagaggcatgaagaggtatgtcaacataagctccttatccttcagt
tcggatgcccagttcctctgtgcctccagcaacacagagactgttcacatctttaaactg
gaacaactgggaccaagtgcggaggacgaggcggctacctggacagcctacatggggaag
atgttctctgcagccagcagctacctccctgctccggtttctggcatgatgagccaggac
cgggctttcgctaccgttcacctcctctcatctggtcagaggaacgtttgcaccttagtc
acgatccaggggctcctgcggctgctggtggccaccgccgacggccagctcttcatctat
aacgtggatccacaggatggaggcgagtgccagttagcttacaaacacaggctcgttggt
gttgatgatgaaacgcacagtggagagatgaagtcagagggggggcagctcacacaggaa
acacactcctctccatcttatgcagaaactgctgccttaccagcttctggtcatgctact
gcaaccctcactggctactctgaagacggcggggcgaaacagggggacgtgattcctgag
cacgagtttgctgtggggccggtgtgtctggacgacgagaacgagttccctcctatccgt
tcttgccgcagcgggactggagatggccagggctga
DBGET
integrated database retrieval system
