Xiphophorus maculatus (southern platyfish): 102232830
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Entry
102232830 CDS
T02923
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102232830 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102232830 (lrrc4b)
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
NGL family
102232830 (lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
102232830
NCBI-ProteinID:
XP_005810181
UniProt:
M4AU91
LinkDB
All DBs
Position
16:complement(3903432..3949761)
Genome browser
AA seq
729 aa
AA seq
DB search
MRIATLTCLSGPSPFLFLLVHLLLRLLLILHGPQLAGAASTCPSLCTCSNQASRVICTRQ
NLEQVPESISVNTRYLNLQENSIQVIKSDTFKQLRHLEILQLSKNQIRQIEIGAFNGLPN
LNTLELFDNRLTLVPTQAFDYLSKLRELWLRNNPIETLPSYAFNRVPSLRRLDLGELKKL
EYISDAAFVGLVNLRYLNLGMCGLKDIPKLTPLVRLEELELSGNRLDIIRPGSFQGLVSL
RKLWLMHSQVSAIERNAFDDLKNLEELNLSHNSLRSLPHDLFTPLHQLERVHLNHNPWAC
NCDVLWLSWWLKETVPSNTTCCARCHAPPLLKGKYIGELDQSHFTCFAPVIVEPPTDLNV
TEGMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYT
CMVTNAAGNTTATAVLNVSAADASVNYTYFTTVTVETDNGGAHDYAQVGIEEASIPIPSD
LLPEVVPTTASSLAGGWSASSPRTTQPTFTVPFTEPGFSGLDDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGPGASGRGSGISGGSTVTQSSGG
GIGGSQSLRLHHPEIVNLPNLARSDHLNHYYKTHHFNSNMMGLGMGTGSGVGLNNNNNPS
PCSQSQSISCSQVPSSTGGGTSTGGTLPSTVALPQLGLHSSLKGLMGKGQNEPLLFKSGS
KENVQETQI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgccacgctgacctgcctttccggcccttcccccttcctctttctattggtc
catctgctcctgcggctccttctcatcctccacgggccgcagttagcgggagccgcctcc
acctgcccttccctctgcacgtgctccaaccaggccagccgggtcatctgcaccaggcag
aacctggagcaggtgcccgaaagcatatcagtcaacacgcgttacctcaacctgcaggag
aactcgatacaggtcatcaaatccgacactttcaagcagctgaggcaccttgaaatcctc
cagctttccaagaatcagatacgccagattgaaatcggggcattcaatggcctccctaac
ctcaacacgctggagctctttgacaaccgcctcacgttggtgccaacacaggcctttgat
tacctcagcaagctacgggagctgtggctgcgcaacaaccccattgagaccctcccgagc
tatgccttcaaccgcgtgccctccctgcgtcgcttggacctgggggagctcaaaaagttg
gaatacatctctgatgcggccttcgtgggcctcgtcaatctacggtacctgaatctgggc
atgtgtgggctcaaagacattcccaagctgacgcctctcgtgcgtttggaagagctagag
ttgtcggggaaccgtctggatatcattcgtccgggatccttccagggactggtgtctctt
cggaagctgtggcttatgcactcgcaggtttccgccattgagcgcaatgcctttgacgac
ctgaaaaacctggaagagcttaatctgtcccataactcactgcgctccctgcctcatgat
cttttcacaccccttcaccagctggagagggtacatctcaatcataatccctgggcctgc
aactgtgatgtactttggcttagttggtggttgaaggagacggtgcccagcaacaccacc
tgctgtgcccgatgccatgctccgccactactcaagggcaagtacattggggaacttgac
cagagccacttcacctgctttgctcctgtcattgtagagccccctaccgacctcaatgtc
accgaagggatggctgctgagctgaagtgtcgcacaagtacctctacaacgtcagttaac
tggattacgcccaacggcacgctgatgactcatgggtcttaccgggtgaggatatccgtt
cttcacgatggcacactgaacttcacaaacgtcaccctgagggatacgggccagtacacc
tgcatggtcaccaacgctgctggaaacaccacagctaccgctgttcttaacgtatctgct
gctgatgccagtgtcaactacacctatttcaccaccgttactgtggaaacggataacgga
ggagctcatgattatgcacaggttggcattgaggaggccagcattcccattccttcggac
ctgttgccagaagtggttcctaccaccgcctcctctctggctggcggctggtcggcctct
tctccccggacaactcaacccacgttcactgtgccgttcacggagccgggattctctggc
ctggacgatgtgatgaagaccaccaagattatcattggctgcttcgtagccatcaccttc
atggcagcagtgatgctggtggtgttctacaagctgaggaagcagcatcagctgcacaaa
caccacggccccgctcgcgccattgagatcatcaacgtggaggacgagctgggacctggg
gcaagtggccggggcagcggtatctccggaggatccactgtgacacaaagctcgggcggt
ggaataggcgggagccagagtcttcggttgcaccacccagagattgtgaacctacccaac
ctggcacgatcggatcaccttaaccactactacaaaacacatcacttcaacagcaacatg
atgggcctgggaatgggcacagggtcaggagtgggcctcaacaacaacaacaacccttcg
ccgtgctctcagtcgcagagcatatcctgctcccaggtcccttccagcaccggtgggggg
acgtccactggtggcaccctgccctccaccgtagccctgcctcagctgggtctacatagc
tctctgaaaggcctgatgggaaaaggtcagaacgagccgctgctttttaagagtggctca
aaggaaaatgtgcaagagactcaaatctaa
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