Xiphophorus maculatus (southern platyfish): 102232937
Help
Entry
102232937 CDS
T02923
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102232937 (trim16)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102232937 (trim16)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102232937 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
102232937
NCBI-ProteinID:
XP_005794854
LinkDB
All DBs
Position
10:complement(11974998..11981285)
Genome browser
AA seq
649 aa
AA seq
DB search
MFRGWGENQAGRDMAEPAAVEAAPAPKQQNLCGVCSGEVSECKPTACGHSVCVSCQGDKT
KGCPKCLQSPAVKPAPDNGPKQNGTAAASPEKTKKEQSQDPKTVEEVKVQGELMESEDPK
APVEGETKPEPQTDQGPEPEEAKEEPLGPNDVVCDSCIETPCRALKSCLTCMVSYCEAHL
RPHLENQKFQNHRLVEPLRDIERRTCESHKWPLELFCCADSCCICQDCLKEEHRGHKTVP
VEEARRQIEKELREKQTQMVKVVTAGDNAINKLQDNRVSIEQSVTKVRSVIESQFQELQV
MVEMAKKEVTEILAAEESQALKQADGIQVHLEQRCTELKKAQAQTEKLSKNKNDVDFLQE
YAEWKKEATDNSLSGIYVGLEDRLDSFSQVIQESTSNLCDMLVATYIQKVKEKCNNDEIG
IKITVQTNTAAKHDVSKPDPQTRTDFLQYAAQVSFDANTAHKFLRLTEENKKVTNTTPWQ
HPYPDVPERFENHRQVLAAESFYVGRHYFEADLSGEGTHVGVTYKSIDRKGDESSSCITG
NKFSWCLQWNGRTYSAWHSDEETPLNVERFTRIGVYVDYSQGLLSFYGVDNTMTLLHQYQ
AQFLEPLYPAFFLPKKENIVVLVAPGEPLPLKSPSPPTSPEHGPFVSQS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagggtggggagagaaccaggcaggaagagacatggcagaaccagcagcggtg
gaagcagctcctgctcccaaacagcagaacctgtgcggtgtctgctcaggtgaagtgagc
gaatgtaagcccacagcttgtggtcactccgtctgcgtttcctgtcaaggagacaaaact
aaaggatgtccaaagtgccttcagagtcctgctgtcaaaccagctcctgacaatgggcct
aagcaaaatggaacagctgctgcttctcctgagaaaaccaaaaaagaacaaagtcaagac
ccaaagactgtggaggaagtcaaagtacaaggagagttgatggagtctgaggatcccaaa
gccccagtagagggtgagacaaagccagagccacagacagaccagggaccagaaccagag
gaagcaaaggaggagccattgggtcccaatgatgtggtgtgtgactcctgcatcgaaacc
ccctgcagggccttgaagtcctgtctcacctgtatggtgtcctactgcgaggcccacctc
cggcctcacctggagaaccaaaagtttcagaaccacaggttggtggagccgctcagggac
attgagcggcgtacctgtgagagtcacaagtggcccttggagctcttctgctgtgctgat
tcctgctgcatctgtcaagactgtttaaaagaggagcatagaggccacaagacagtccct
gtagaggaggctcggagacagatagagaaagagctgagggagaaacagacacagatggtg
aaggtggttacggcaggagacaatgccatcaacaaactccaagacaacagagtttctatc
gagcaatcagtgacaaaagtacgatctgtgatcgagagccagttccaggagcttcaagtg
atggtggagatggccaagaaggaggtgactgagatcttggcggctgaggagagccaggcg
ctgaagcaagctgatggcatccaggttcacctggagcagaggtgtacagagctgaaaaaa
gctcaagcccaaacggagaagctgtccaaaaataaaaatgatgtagatttcctgcaggag
tatgctgagtggaagaaagaagccactgataattctctatctggtatctatgttggcctg
gaggatcgtttggactccttcagtcaggtgatccaggagtccacaagcaatctttgtgac
atgctggtcgctacatacattcagaaggtcaaggaaaaatgcaacaatgatgaaatagga
ataaagataacagttcaaacgaatactgcagccaagcatgacgtatccaaaccagaccca
cagacccgtactgactttctccagtatgccgctcaagtaagtttcgatgctaacacggcc
cacaagttcctccgcctgactgaggagaacaagaaggtgaccaacaccacaccctggcag
catccttatcccgatgttcctgaacgctttgagaaccatcggcaggtcctggctgctgaa
agcttctatgtaggtcgccactactttgaggccgatcttagtggtgaaggcacacatgtc
ggggtcacatataagagcattgaccggaagggggatgagagcagcagctgcattacagga
aacaagttctcttggtgtctccagtggaacgggcgaacctactcagcatggcacagcgac
gaggagacaccactgaacgtggagaggttcactcgaattggtgtttacgttgactattcg
caaggccttctttctttctatggggtggacaataccatgacactccttcaccagtatcag
gcccagtttctagagccactttatccagctttcttcctgcccaagaaagagaatattgta
gttctggtggctcctggggaaccattaccgctgaaaagcccctctccccctacttcacca
gaacatggaccctttgtttcgcaatcctaa
DBGET
integrated database retrieval system
