Xiphophorus maculatus (southern platyfish): 102232938
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Entry
102232938 CDS
T02923
Name
(RefSeq) blastomere cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04371
Apelin signaling pathway
xma04514
Cell adhesion molecules
xma04520
Adherens junction
xma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102232938
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102232938
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102232938
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102232938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102232938
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102232938
04090 CD molecules [BR:
xma04090
]
102232938
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
102232938
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Major cadherins
102232938
CD molecules [BR:
xma04090
]
Proteins
102232938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
He_PIG
Tc-R-P
DUF6716
Motif
Other DBs
NCBI-GeneID:
102232938
NCBI-ProteinID:
XP_023183626
UniProt:
A0A3B5QH95
LinkDB
All DBs
Position
22:25231340..25256224
Genome browser
AA seq
1110 aa
AA seq
DB search
MGTIWFPVWCALFLNVQASPAGHTEDQICEPEFDSESVIFKVTEKHLRPTTIVGKVNFTD
CTDVTRLIFTTYDSHFYVETDGTVTVSRWLVLQEGQRRFDIHSWDSKGKKRTVSVVVQYQ
GDHDAAHSIQSDFPLKDITNNLEDAPQVPILYFPKSNSGLKRRKRFWVVPPLSVSENHRG
PYPLALARIRSDIDKVKMTYYRITGPGADEFPVGLFTMDRNTGHLYVTQELDREKQDKYM
FQVHAVVDGSAPAEEPMEIIVNVIDQNDNKPVFTFLGNVAESSSIGSEVMKVTATDADEP
NNDNSQISYRIVSQEPQQPNPSMFVINPTTGAISVNAAGLDRQKYPEYTLEVKAADMNGE
GHSALTKVIISVTPGTELPVPVLHFPSSSEGLRRKKRWIIPPINIAENSRGPFPLHIAQI
RSEADKIKKIHYKITGPGADQPPVGLFTMDRDTGHLYVTQELDREKKDRYEFQVHAVVDG
SAPAEEPMEIIVNVIDQNDNKPVFTFLGNVAESSSIGSEVMKVTATDADEPNNDNSQISY
RIVSQEPQQPNPSMFVINPTTGAIRVNAAGLDRQKYPEYTLEVKAADMNGEGHSALTKVI
ISVTPGTELPAAQGGGRSRRDADLKIHHSSSEKMFLNLLPLPSEEGMRRRKRSWVIPPLS
VPENSRGPFPLKLAQVRSDRSQVTKIIYRLRGPGADQPPVGLFIIDSDSGWLEVTQELDR
ENQDKYRLEALAVEEGQAEASESIEIIVNVIDQNDNKPVFSRDTFKGEVPQSSAKGFEVM
TVQATDPDEENSDNSDVCYRIIRQEPEEPNPSMFAINTTTGLITVDATGLDREKHPQYTL
TVVAADMKGEGLMGIAKVILTITDSSSPTGWVIPDITVPENGIGPFPLQLAQIRFNEDET
KKILYSISGPGADQPPVGLFTMDGDTGHLYVTQGLDRENQNKYTLQVNAVAEDGGATVGQ
TQAVVKVTDQNNNKPVFNKDTYEGEVPEASPIGFEVIKVEATDADEPNTDHSEIRYSIIS
QEPAEPSMFTIDPVSGAITLSTDGLNREKHPQYTLLVRAEDSAGKGSTTLFEQVKVILTV
TANSASMSQAGEAKRRRKRFSTAPLSVMEK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggggaccatttggttcccagtttggtgtgctttattcttgaatgttcaggcttcacca
gcagggcacacagaagaccaaatatgtgaaccagaatttgactcagaatcagttattttt
aaggtgactgaaaagcatctgaggccaaccacaatcgtgggaaaagtgaacttcaccgac
tgcacagatgtcacaaggcttattttcaccacttacgattcccatttctatgttgagact
gatgggacagtaacggtttcgagatggttggttcttcaggagggacaacgacgtttcgac
atccactcctgggattcaaaaggcaagaaacggactgtctctgttgtggttcagtaccaa
ggggatcatgacgcagcccacagcatccagagtgattttccccttaaggacatcacaaat
aacttggaggatgctccacaggttcccattctgtatttcccaaaatctaattcaggactg
aagaggaggaagagattctgggttgtccctcctcttagtgtttctgagaatcacagagga
ccttatccccttgctcttgctcggattcgctctgatatcgataaagtgaagatgacctat
tacagaatcactggtcctggagctgatgagtttcctgttggtctttttaccatggataga
aacactggtcatctgtatgtcacacaggaactggacagagagaaacaggacaagtacatg
ttccaggtacatgctgtggtggacggttcagcccctgctgaggagcctatggagattatt
gtcaatgttattgaccagaatgacaacaaacctgttttcaccttcttgggaaatgtggcc
gagtcttcatcaataggttctgaggtgatgaaggttacggctacagatgctgatgagcca
aacaatgacaactcacaaatcagttatcgcattgtgagccaggaacctcagcaaccaaat
ccatccatgtttgtcataaacccaactactggagccatcagtgtcaatgctgctggactg
gacagacagaaatacccagagtataccctggaggtaaaagcagcagatatgaacggggag
ggacattctgcattaacaaaagtaatcatctctgtaactcctggcaccgagctccctgtt
cctgtcctgcatttcccatcatccagtgaaggactgaggaggaaaaagagatggattatt
cctcctattaatattgcagagaattccagaggacctttccctttacatattgctcagatt
cgttctgaagctgataaaattaaaaagatccattacaaaatcactggtccaggagcagat
cagcctcctgttggtcttttcaccatggacagagacactggtcatctatatgtcacacag
gaactggacagagagaaaaaagacagatatgagttccaggtacatgctgtggtggacggt
tcagcccctgctgaggagcctatggagattattgtcaatgttattgaccagaatgacaac
aaacctgttttcaccttcttgggaaatgtggccgagtcttcatcaataggttctgaggtg
atgaaggtcacggctacagatgctgatgagccaaacaatgacaactcacaaatcagttat
cgcattgtgagccaggaacctcagcaaccaaatccatccatgtttgtcataaacccaact
actggagccatccgtgtcaatgctgctggactggacagacagaaatacccagaatatacc
ctggaggtaaaagcagcagatatgaacggggagggacattctgcattaacaaaagtaatc
atctctgtaactcctggcaccgagctccctgctgcccaaggaggagggaggagcaggagg
gatgcagatctaaagattcatcattcttcttcagagaaaatgttcctaaatctgttacct
cttccatctgaagaagggatgaggagaaggaagagaagctgggttattcctcccctcagt
gttcctgagaatagcagaggaccgtttcctctaaaacttgctcaggtccgctctgacaga
agtcaagtgacgaaaatcatttacaggcttcgtggtccaggagccgatcagccacctgta
ggccttttcattatagacagcgactctggttggttggaagtcacacaagaactggacaga
gagaaccaggacaagtacagattagaagcacttgcagtggaagaaggacaagctgaagca
tctgagtccattgaaataattgtgaatgtaatcgatcagaatgacaacaaaccagttttc
agcagagacaccttcaagggagaagtgcctcagtcctcagccaaaggttttgaggtgatg
acggttcaggccacagatcctgatgaggaaaattctgacaactccgatgtctgctatcgc
attataagacaagaacccgaagaaccaaatccttccatgtttgcaatcaacacgactact
gggcttatcacagtcgacgctacagggctggacagagagaaacacccgcagtacacactg
acagtggtagctgctgacatgaaaggcgaggggctgatggggatagccaaagtcatcctg
actataactgatagttcttcccctactggctgggttattcctgacattacagttcctgag
aacggaattggaccctttcctttacagctggctcagatccgctttaatgaggatgaaaca
aagaagatcctttacagcatcagtggaccaggagcagatcagcctcctgttggtcttttt
accatggacggagacactggtcacctgtatgtaacacagggactggacagagagaaccag
aacaagtacacattgcaggtaaatgctgtggcagaggatggaggggcgacagtaggacag
acacaggctgtggtcaaagttactgaccagaacaacaacaaacctgtttttaataaagac
acctacgagggagaagtgcctgaagcctcgcccataggttttgaggtgattaaagtggag
gccacagatgctgatgagccaaatactgaccactcagagattcgctatagcattataagc
caggaaccagcagaaccctccatgtttaccatcgacccagtttctggagccatcactctt
agtactgatggactgaatagagagaaacaccctcagtacactctgctggtcagagcagaa
gactctgctggcaaaggcagcactactttatttgagcaagttaaagtaattctgactgtg
acagcaaactctgcgtccatgtctcaggctggtgaagcaaagaggaggaggaagcgtttt
tccacagctccattatctgtcatggagaagtga
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