Xiphophorus maculatus (southern platyfish): 102232938
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Entry
102232938 CDS
T02923
Name
(RefSeq) blastomere cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04371
Apelin signaling pathway
xma04514
Cell adhesion molecule (CAM) interaction
xma04517
IgSF CAM signaling
xma04518
Integrin signaling
xma04519
Cadherin signaling
xma04520
Adherens junction
xma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102232938
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102232938
04517 IgSF CAM signaling
102232938
04518 Integrin signaling
102232938
04519 Cadherin signaling
102232938
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102232938
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102232938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102232938
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102232938
04090 CD molecules [BR:
xma04090
]
102232938
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
102232938
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Major cadherins
102232938
CD molecules [BR:
xma04090
]
Proteins
102232938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_pro
Tc-R-P
DUF6716
Motif
Other DBs
NCBI-GeneID:
102232938
NCBI-ProteinID:
XP_023183626
UniProt:
A0A3B5QH95
LinkDB
All DBs
Position
22:25231340..25256224
Genome browser
AA seq
1110 aa
AA seq
DB search
MGTIWFPVWCALFLNVQASPAGHTEDQICEPEFDSESVIFKVTEKHLRPTTIVGKVNFTD
CTDVTRLIFTTYDSHFYVETDGTVTVSRWLVLQEGQRRFDIHSWDSKGKKRTVSVVVQYQ
GDHDAAHSIQSDFPLKDITNNLEDAPQVPILYFPKSNSGLKRRKRFWVVPPLSVSENHRG
PYPLALARIRSDIDKVKMTYYRITGPGADEFPVGLFTMDRNTGHLYVTQELDREKQDKYM
FQVHAVVDGSAPAEEPMEIIVNVIDQNDNKPVFTFLGNVAESSSIGSEVMKVTATDADEP
NNDNSQISYRIVSQEPQQPNPSMFVINPTTGAISVNAAGLDRQKYPEYTLEVKAADMNGE
GHSALTKVIISVTPGTELPVPVLHFPSSSEGLRRKKRWIIPPINIAENSRGPFPLHIAQI
RSEADKIKKIHYKITGPGADQPPVGLFTMDRDTGHLYVTQELDREKKDRYEFQVHAVVDG
SAPAEEPMEIIVNVIDQNDNKPVFTFLGNVAESSSIGSEVMKVTATDADEPNNDNSQISY
RIVSQEPQQPNPSMFVINPTTGAIRVNAAGLDRQKYPEYTLEVKAADMNGEGHSALTKVI
ISVTPGTELPAAQGGGRSRRDADLKIHHSSSEKMFLNLLPLPSEEGMRRRKRSWVIPPLS
VPENSRGPFPLKLAQVRSDRSQVTKIIYRLRGPGADQPPVGLFIIDSDSGWLEVTQELDR
ENQDKYRLEALAVEEGQAEASESIEIIVNVIDQNDNKPVFSRDTFKGEVPQSSAKGFEVM
TVQATDPDEENSDNSDVCYRIIRQEPEEPNPSMFAINTTTGLITVDATGLDREKHPQYTL
TVVAADMKGEGLMGIAKVILTITDSSSPTGWVIPDITVPENGIGPFPLQLAQIRFNEDET
KKILYSISGPGADQPPVGLFTMDGDTGHLYVTQGLDRENQNKYTLQVNAVAEDGGATVGQ
TQAVVKVTDQNNNKPVFNKDTYEGEVPEASPIGFEVIKVEATDADEPNTDHSEIRYSIIS
QEPAEPSMFTIDPVSGAITLSTDGLNREKHPQYTLLVRAEDSAGKGSTTLFEQVKVILTV
TANSASMSQAGEAKRRRKRFSTAPLSVMEK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggggaccatttggttcccagtttggtgtgctttattcttgaatgttcaggcttcacca
gcagggcacacagaagaccaaatatgtgaaccagaatttgactcagaatcagttattttt
aaggtgactgaaaagcatctgaggccaaccacaatcgtgggaaaagtgaacttcaccgac
tgcacagatgtcacaaggcttattttcaccacttacgattcccatttctatgttgagact
gatgggacagtaacggtttcgagatggttggttcttcaggagggacaacgacgtttcgac
atccactcctgggattcaaaaggcaagaaacggactgtctctgttgtggttcagtaccaa
ggggatcatgacgcagcccacagcatccagagtgattttccccttaaggacatcacaaat
aacttggaggatgctccacaggttcccattctgtatttcccaaaatctaattcaggactg
aagaggaggaagagattctgggttgtccctcctcttagtgtttctgagaatcacagagga
ccttatccccttgctcttgctcggattcgctctgatatcgataaagtgaagatgacctat
tacagaatcactggtcctggagctgatgagtttcctgttggtctttttaccatggataga
aacactggtcatctgtatgtcacacaggaactggacagagagaaacaggacaagtacatg
ttccaggtacatgctgtggtggacggttcagcccctgctgaggagcctatggagattatt
gtcaatgttattgaccagaatgacaacaaacctgttttcaccttcttgggaaatgtggcc
gagtcttcatcaataggttctgaggtgatgaaggttacggctacagatgctgatgagcca
aacaatgacaactcacaaatcagttatcgcattgtgagccaggaacctcagcaaccaaat
ccatccatgtttgtcataaacccaactactggagccatcagtgtcaatgctgctggactg
gacagacagaaatacccagagtataccctggaggtaaaagcagcagatatgaacggggag
ggacattctgcattaacaaaagtaatcatctctgtaactcctggcaccgagctccctgtt
cctgtcctgcatttcccatcatccagtgaaggactgaggaggaaaaagagatggattatt
cctcctattaatattgcagagaattccagaggacctttccctttacatattgctcagatt
cgttctgaagctgataaaattaaaaagatccattacaaaatcactggtccaggagcagat
cagcctcctgttggtcttttcaccatggacagagacactggtcatctatatgtcacacag
gaactggacagagagaaaaaagacagatatgagttccaggtacatgctgtggtggacggt
tcagcccctgctgaggagcctatggagattattgtcaatgttattgaccagaatgacaac
aaacctgttttcaccttcttgggaaatgtggccgagtcttcatcaataggttctgaggtg
atgaaggtcacggctacagatgctgatgagccaaacaatgacaactcacaaatcagttat
cgcattgtgagccaggaacctcagcaaccaaatccatccatgtttgtcataaacccaact
actggagccatccgtgtcaatgctgctggactggacagacagaaatacccagaatatacc
ctggaggtaaaagcagcagatatgaacggggagggacattctgcattaacaaaagtaatc
atctctgtaactcctggcaccgagctccctgctgcccaaggaggagggaggagcaggagg
gatgcagatctaaagattcatcattcttcttcagagaaaatgttcctaaatctgttacct
cttccatctgaagaagggatgaggagaaggaagagaagctgggttattcctcccctcagt
gttcctgagaatagcagaggaccgtttcctctaaaacttgctcaggtccgctctgacaga
agtcaagtgacgaaaatcatttacaggcttcgtggtccaggagccgatcagccacctgta
ggccttttcattatagacagcgactctggttggttggaagtcacacaagaactggacaga
gagaaccaggacaagtacagattagaagcacttgcagtggaagaaggacaagctgaagca
tctgagtccattgaaataattgtgaatgtaatcgatcagaatgacaacaaaccagttttc
agcagagacaccttcaagggagaagtgcctcagtcctcagccaaaggttttgaggtgatg
acggttcaggccacagatcctgatgaggaaaattctgacaactccgatgtctgctatcgc
attataagacaagaacccgaagaaccaaatccttccatgtttgcaatcaacacgactact
gggcttatcacagtcgacgctacagggctggacagagagaaacacccgcagtacacactg
acagtggtagctgctgacatgaaaggcgaggggctgatggggatagccaaagtcatcctg
actataactgatagttcttcccctactggctgggttattcctgacattacagttcctgag
aacggaattggaccctttcctttacagctggctcagatccgctttaatgaggatgaaaca
aagaagatcctttacagcatcagtggaccaggagcagatcagcctcctgttggtcttttt
accatggacggagacactggtcacctgtatgtaacacagggactggacagagagaaccag
aacaagtacacattgcaggtaaatgctgtggcagaggatggaggggcgacagtaggacag
acacaggctgtggtcaaagttactgaccagaacaacaacaaacctgtttttaataaagac
acctacgagggagaagtgcctgaagcctcgcccataggttttgaggtgattaaagtggag
gccacagatgctgatgagccaaatactgaccactcagagattcgctatagcattataagc
caggaaccagcagaaccctccatgtttaccatcgacccagtttctggagccatcactctt
agtactgatggactgaatagagagaaacaccctcagtacactctgctggtcagagcagaa
gactctgctggcaaaggcagcactactttatttgagcaagttaaagtaattctgactgtg
acagcaaactctgcgtccatgtctcaggctggtgaagcaaagaggaggaggaagcgtttt
tccacagctccattatctgtcatggagaagtga
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integrated database retrieval system
