Xiphophorus maculatus (southern platyfish): 102232986
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Entry
102232986 CDS
T02923
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
xma03420
Nucleotide excision repair
xma04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102232986 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
102232986 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102232986 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xma01001
]
102232986 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102232986 (cdk7)
03019 Messenger RNA biogenesis [BR:
xma03019
]
102232986 (cdk7)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102232986 (cdk7)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
102232986 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
102232986 (cdk7)
Protein kinases [BR:
xma01001
]
Serine/threonine kinases: CMGC group
CDK family
102232986 (cdk7)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102232986 (cdk7)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
102232986 (cdk7)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102232986 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Kinase-like
APH
Motif
Other DBs
NCBI-GeneID:
102232986
NCBI-ProteinID:
XP_005804053
Ensembl:
ENSXMAG00000007316
UniProt:
A0A3B5QQX8
LinkDB
All DBs
Position
12:19154522..19163735
Genome browser
AA seq
343 aa
AA seq
DB search
MALDVKTRAKRYEKLDFLGEGQFATVYKARDKVTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPAHIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGSGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
TSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRTTATQALKMRYFSNRPG
PTPGAQLPRPNSSVEALREKETVGLKRKIDGLDTTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtgaaaactagagcaaaacgatacgagaagctggacttcctcggcgag
ggtcagttcgccacagtatataaagccagagacaaagtgactgacacgatagttgcaatt
aaaaagattaaggtcggacacagaactgaggccaaagatggtataaaccggactgctctc
agggagatcaaattactccaggagctgcatcatccaaacatcatcgggctgttggatgca
tttggacacaaatcaaatataagcttggtgtttgacttcatggaaacagacctggaggtc
atcatcaaagacaccagccttgtcttaactccagcccacattaaagcctatatcctcatg
acgttacaagggttggagtacatgcaccaacactgggtcctgcacagagatctgaagccc
aataatctgctgttagacgggagtggagtgttgaagttggctgattttggtttggccaaa
gcttttggcagccccaacagagtctacacacatcaagttgttaccaggtggtaccgttct
cctgagctcctgtttggtgccaggatgtacggtgtgggcgtagacatgtgggctgtggga
tgcatactggctgagttactgcttcggataccgtttctcgctggagactcagatcttgac
cagctgactaaaatctttgaagctcttgggactcccacagaagagacgtggcctgggatg
acgagcctaccagattatgtctccttcaagatatttcctggcacccccctggagcatata
tttagtgcggctggagacgatttactcgagctcctgcaaggcctcttcacctttaaccca
tcaacaagaacaacggccacacaggctctaaagatgaggtacttcagtaatcgccctggt
cccactcctggtgcccagcttccccgacccaacagctcagtagaggctttgagggagaag
gaaactgttggactaaagaggaaaatagacggcttggatacaactgttatgaagaagaag
ctcattttctga
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