Xiphophorus maculatus (southern platyfish): 102232996
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Entry
102232996 CDS
T02923
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102232996
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102232996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
102232996
NCBI-ProteinID:
XP_005807124
Ensembl:
ENSXMAG00000017880
UniProt:
A0A3B5PT77
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Position
11:complement(28613976..28648159)
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AA seq
507 aa
AA seq
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MMMAGGGDGGGAAAMDHNGIYTNPNLHNLQQQQSQMEADNPDSRKRPLETPAEEAGCTKR
TNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL
IQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGL
IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDP
QSSSCLNISYSNVSGPVANSNPTGSPYANTAEVLPNAAAAAATASSLLGQAGLTGMGAFP
AAMSSFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAAN
LLASYANDASSSAGHPATGLGGFSLGSLAAATGASNGYLNASSPLMASSLLATEKLADGA
KDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAA
TQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggccggtggtggagatggtggtggagcagcagctatggaccacaacgggata
tacacgaacccgaacctccacaacctgcagcagcaacagagtcaaatggaggcggataac
ccggattcccgcaaacggccgctggaaactccggctgaagaggccggctgtaccaagcgc
accaacaccggagaggagggtgagtacttcctgaaggtgctgatccccagctatgcagcc
ggctctataattggcaagggtggccagaccatcgtacaactgcagaaagagacgggtgcc
accattaagctgtccaaatccaaagacttctaccccggaacaactgaaagagtctgtctg
atacagggtactgtcgaagccctcaatagtgtccacaacttcattgcggagaaagtccgc
gagatgccccagagtgcccagaaaccagaacctgtcagcatattgcaaccacagacgacg
gttaaccctgaccgcgttaaacaggccaaattgattgtacccaatagtaccgctgggctg
atcattggcaagggtggtgccacagtgaaagcggtgatggagcagtcgggagcttgggtg
cagctctctcagaagccggagggcatcaacttgcaggagcgggtggtgaccatcagtgga
gaaccagaacagaaccgtaaggctgtggaaatcattgtacagaaaatccaggaggaccct
cagagcagcagttgcctgaatatcagctactccaacgtctcgggcccagtggccaactcc
aaccccaccggctccccttacgccaacacagccgaggtgctgcccaacgcagccgcagca
gctgccactgcctccagccttctgggtcaggccggattgacaggaatgggtgccttccct
gccgccatgtccagtttctctggcaacgatctgctggccatcacctcagccctgaataca
ctggccagctacggctacaacactaacaccctgggcctgggtctcaaccccgcagctgcc
tctggagtcctcgctgcagtggcagctagtgccaacccagctgctgctgctgcagctaac
ctattagcctcctacgctaatgatgcctccagcagtgccggccaccccgctacaggcctc
ggtgggttctccctgggctcactagcagctgctactggagcttccaatggttacctaaat
gcttcatccccattgatggcttcctccctgttggcaacagaaaagttagcagacggagcc
aaggacgtggttgaaattgctgtgcccgagaatctggtgggtgccattttggggaaagga
gggaaaacactggtagagtaccaggagctgacaggagcccgcatccagatctccaaaaaa
ggagagttcattccaggtactcggaaccgtaaagttacaataacagggtcgccggccgct
acacaagcagcgcagtatctgatcagccagcggatcacgtacgagcagggcgtgcgcgct
accaacccacagaaggtgggctaa
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