Xiphophorus maculatus (southern platyfish): 102233150
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Entry
102233150 CDS
T02923
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X4
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102233150 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102233150 (nfrkb)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
102233150 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
CDC48_2
Motif
Other DBs
NCBI-GeneID:
102233150
NCBI-ProteinID:
XP_014326798
Ensembl:
ENSXMAG00000011179
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All DBs
Position
11:complement(18630747..18642608)
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AA seq
1277 aa
AA seq
DB search
MDPLEHMLTDPLEPKEEDGRQITEECLLGNCKVDLPEVLLEDPDIFFSVLSENTWDEVLT
DSQRQHLQQFLPQFPDNNTEEQDRTIRELFNNTNFNFGNPLHLAQRLFRDGYFNPEVVKY
RQLCAKSQRKRQLHSLQQYYHRLLKQILVSRKELLDFAVQNSLDFPPKRRLPNRTQPETR
ESRVRRRLSRILKDVKVECEDSNASSDDEDVSVWNPAPQSPSSPTPTISLRVLPSLSTPD
MKITEKVELGEMDLKVMLHHHREKRKRQPDHPDLITSDIHLGDVLSRANIGRKGALPLFD
LLLPKKKMRDERKKKKLKAIKVESEDPCEILTPSDSCSAPPVNIINSLPEAPSTPLANIK
EEIVEEAQSSPVAVEEITASFFSLLESIFRAEGPASTLMLEEKVQTWQSSPASSLNTWFS
SASCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFVDDFQQWRWIGPTQDTEKDLIAL
CQLWLDSKDFVVKTENEDLLELTSPTPKLSTDYVVRPSTGDEKQVFQVQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRLRS
QEEFERIHQAQAAAAKARKAQQQKPKPASKPKSGSKDGSSKTPGSLEAGLDLGCNSMSPV
PTTPTPNTPGTPKSPLHLSATTPTKTGVPDTLKTSPGVLLVSPPSLPQLGTILPTSQACP
PASQPVTSQQAARIVSHLAAGSLPQVRVVSTQPSGLGPSAAAQQATLVHQTSHQIRMPVS
MAAKGISQAVVSVPLRSPSGSSPVQVPTSLSVSAINVTKPQTGSPGSPANNPTPPAVLQG
VTSPNIKQVSITGQLGMKTPGGGGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRIT
PDMMATLAKSPVATVKLTSDFLGGAASGSKSISATLHVAPPHPSPSPASATPPSTAEAQS
AKSGSVASTLLKAGGETAIRLMPTLAVSVADQKSRTFSTVASPDKSSATIRIMPGLGVIP
QKQGQTITMTTASGSKPLAASTCGNIVTMAASVVAGAKGITVAPAASGSPLSLGVTTATV
RQVPASVVTTQTGKLPARITVHSVLNQPLKSKSVVTTPIVKGNLNTNISSLGRNIILTTV
PAGTKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVPTQQLQHVAASSPKPVSTVVVT
TAPPPKCTPDPPPAPQQ
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcttgaacacatgctgacagaccctctggagcctaaagaggaagacggaaga
caaattactgaggagtgtttgcttgggaactgtaaagtggacctcccagaggttctgctg
gaggatcctgacatttttttctctgtgctgagtgaaaacacttgggatgaagtactgaca
gactcccagagacaacatctgcaacagtttctgccacagtttcctgacaacaacacagag
gagcaggatcgtaccatcagggagttgttcaacaacaccaactttaactttgggaatcca
cttcatcttgcacagaggctgttcagagatggttacttcaatccagaggtggtcaagtat
agacagttgtgtgccaaatcccaaaggaagcgccagctgcattcccttcagcagtattac
cacagactcttgaagcagattcttgtttccagaaaggagctgctcgactttgcagttcag
aacagtctggactttccacccaaacgacggctgccaaacaggactcagcctgagacacgg
gagtcgagagtaagaagaagactgagccgcatcctgaaggacgtcaaagttgagtgtgag
gacagcaatgcttcctctgatgacgaagacgtgtcagtgtggaatccagcccctcagtct
ccgtcttctcccactcctaccatctcactcagagttcttcctagcctctctacaccagac
atgaagattacagaaaaagtagaattaggggaaatggatttaaaagtcatgctgcatcac
catcgtgagaaaaggaaacgccagccagatcatccagacttgataacctctgatatccac
cttggggatgttctctcaagagcaaacattggtcggaagggagctttgccactttttgat
ttgttgcttcccaagaagaagatgagagatgagagaaagaaaaagaaactcaaggcgata
aaagtggaatctgaggatccttgtgaaattctgactccttcagactcctgctcagcacca
ccagtgaatatcatcaactctttgccagaggcgccttccacacctctagccaacatcaag
gaggaaattgtggaggaagctcaaagcagccctgttgcagttgaggaaataaccgccagt
ttcttcagcttgttggaaagcatcttcagagcagagggtcctgccagtaccttgatgttg
gaggaaaaggttcagacttggcagtcctctccagccagttcgctcaacacctggttttca
tctgcctcatgctggtcagacctagttcttcaagctctgcagtttcttgcaggagagact
aaagatggcatgatggcgctccctagtggcttttctccgtttgtggagtttgtcgatgat
tttcagcagtggagatggatcggccccactcaggacacagaaaaggacctcattgcgctc
tgtcaactctggctggactccaaagacttcgttgtcaaaacagagaatgaagacctgttg
gagcttacgtcccccactcccaaactttcaactgattatgtggtgcggccgagcaccgga
gatgagaaacaagtgtttcaagttcaggagcagcagcgatataaccagcctcacaaagcc
tttaccttcaggatgcatggcttcgagtccgtggtggggccagttaaaggcgtgtttgat
aaggaaatgtccttaaataaagccagagaacacacactgcttcgctctgaccgaccacca
tacgtcaccatcctctctctggttcgggatgcagctgcccggttacccaatggagaggga
acaagggcggaaatctgtgaacttttaaaagattcccagttccttgctccagatgtcaca
agcgcacaagtgaacacagttgtcagcggggctctggacagacttcactatgagaaggat
ccctgtgtgaagtacgacatcggccgcaaactgtggatttacctgcatcgcctccgcagt
caggaagagttcgagaggatccatcaggctcaagctgcggctgcaaaagcaagaaaagct
cagcagcaaaaacccaaaccagcatctaaaccgaagtctggaagtaaagatggaagcagc
aaaacacccggatctctggaggccggactggacctgggctgtaattccatgtctccagtc
ccaacaactcccaccccaaacactcctggaacccccaaatcacctctacatctctctgct
accacaccaacaaagaccggagttccagacacgctgaaaaccagcccaggcgttctcctc
gtctctcctccatcgctgcctcagctgggaacgatcctacccacgagtcaggcttgtccg
ccggcctcccagccagtaacttcccagcaggcagctcggatagtgagccacctggcggcg
ggctccctccctcaggtccgggtcgtttccactcagcccagcggtctgggtccatcagca
gccgctcagcaggccactctggtgcatcagacatcgcaccagatccggatgcctgtgtcc
atggcagccaagggcatttcacaggctgttgtttccgtgcctctaagaagtccgtctggt
agcagtcctgtccaggttccaaccagtctctctgtgtcggctattaatgtgaccaaacct
cagaccggttctccaggtagccccgctaacaaccccactcctccagctgtgctgcaaggt
gtcacctccccgaacatcaaacaggtttccatcactgggcagctgggaatgaagactcca
ggtggaggaggaattccaataactgcaacaaacttgcgtatccagggtaaagatgtcctc
cgtctccccccatcctccatcaccaccgatgctaaaggccaaacagtgctgcggataacc
cccgacatgatggccactcttgccaaatctccggtcgcgactgtaaagctcacctctgac
ttcctgggcggggccgcctccggcagcaagagcatatcagccacgctccacgtagcaccg
cctcacccttcaccatcacctgcctccgctaccccacccagcaccgcggaggcgcagtcg
gctaaatcgggctccgtcgcctccaccttgctgaaagctggaggagaaacagccataagg
ctgatgccgactttggccgtcagcgtggccgaccaaaaatccaggaccttctccaccgtg
gcatccccagacaagagcagcgcaaccatccgcataatgcccggccttggggtcattccc
cagaaacagggtcagaccatcaccatgacaaccgccagtggcagcaaaccactagcagcg
tctacatgtggcaacatagtgaccatggcagccagcgttgtggctggagctaaaggcatc
accgtggctcccgcagcctccggttcaccgctgtctttgggagtgactaccgcgactgtg
agacaagtccctgcttcggttgttacaacacaaacgggaaagctacctgcccggatcact
gtgcactccgtcctcaaccaacccctgaagagcaagagtgtggtgacgactccgatagtc
aaagggaacctcaatacaaatatcagcagcctgggtaggaacatcatcctaaccacggtg
cctgcaggcacaaagctaatagcggggaacaagccggtcagtttcgttaccgcacaacaa
ttccagcagcttcagcaacaaggccaggcaacacaggttcggatccaaacggtcccgact
cagcagctccagcacgtggcagccagttcccccaaacccgtttcaacagtggttgtcacg
acagcaccaccacctaaatgtacacccgatcctccacccgctcctcagcaatga
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integrated database retrieval system
