Xiphophorus maculatus (southern platyfish): 102233185
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Entry
102233185 CDS
T02923
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102233185 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
102233185 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
NACHT
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
NPHP3_N
Beta-prop_EML
AAA_16
NBCH_WD40
DUF4062
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_CAF1B_HIR1
AAA_22
Beta-prop_WDR75_1st
APAF1_C
AAA_26
NPHP3
SLFN-g3_helicase
Y_phosphatase
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
102233185
NCBI-ProteinID:
XP_014329714
Ensembl:
ENSXMAG00000010720
LinkDB
All DBs
Position
9:31097148..31109556
Genome browser
AA seq
1647 aa
AA seq
DB search
MDGEQSSGVQDILRGRCQGAQRTGSNMIRIFISSSFTDMSVERKVLLEKAFPEVRSFCRS
LGLVFEVVDLSWGIRTFPYGDHEVGEIFLQEIQTSQKVSAGPAFVGLLGNRYGHRPLPRL
IPEKQFEVLLSKLSKNPEAVQQLQEWFRKDNNSVPPTYVLQPITARFPHYNDLRPEVAKL
HDDDLLSWHVTESQLLQLLRSAAAEAETAGDITAEQKRLFYSSGETCPPAWTCPRACPFG
PGGLTFPASHSVTERALEEGVWKDNCQMSALLFVREIPRQRMKNGAKRLAKFMDLTADGL
LDAEAQELLTGLKSRLYATSKKILNLHCVELNKGSIDPKRKEHAEYLDSICQQFISQMTT
QISEAVKLAGEDRRKIWGSTEEDEEEFDWVVEEARQHTIMAAELSKSLQGRDGLLGKICL
AMWESSPVHHSPLVVHGAAGMGKTILLCKLAQEMQGVLEAKAVLVIRLLAANHPQRPSIN
HVLHSVCLQVCLACGLAPHPLLSVSSHLELQRLFQNLLEEVSQQGNTLLLILDSLEQLAD
QHQAHQLRWLPTDVPPNVHLLVSMETTSELFASTRLRLGAAGNLFEVERLSRDEGQQIME
SHLQAAQRTLTREQKDAVLQSFHASGSPLHLQLILSAAKHWTSFTPTTQLLLGSSSEEVM
SQLLLKLEEKHGKELVGGALGCIVLARRGLMEAELRDVMSLDDDVISEVYRYSLPPTPSL
IRMPPILWARLKQDLQDQLEVQWTDGVAMLAFSSRLLSEVVKARYLTPERQGRIHRILAE
YFLGRWSGRLKPVALPGLTLLLSDRKVPPQPLWFAPGLANVRKLQELPYHLVHAGLWEEL
RQEVVGSAEWLYCQSRVCGVSSLISDLDQCSQYMDCSETGLVREALVLMKPGLDILSGHM
DRSVFYSELLARLSSLASTFRTVIGRLCSQCDDWLQTCPEPVLIPRSTFLQQPGGALQHT
LTAPHGGVLCLAVGAALRLLVTGSAGGVVAVWSLRDKHLQQVLQGPSAAILSVKIIESSA
HCLSLAADGSLRRWSLKSGQQLFCIQEAGPAGSAPSAARLQVSEQLLFVHTWMQVKVWKS
DGTEIHSEDDSLVLGVLGDVVVSLHDLDRVRIFDPVTGSQTMVRLTRSLTPVISVSSPKC
GSIFVVSEDGILHQISRTGQQTVAEFPRLPSLFSASEDEKILIAGWERTLSLFRVCGDSV
DGFLELQHDDEVLSACVSPDSRRVVTGAADQLIRIWSVTTGRLLDALSGCSAPVTSLLLY
DHLVVSASSAADSVQLWSLTYDPSHKPLPHIPAGSAHSAVTRDGDQVFYVRHQNQREVLS
WNNRTGSVSERLPVSAEVSCLELAQQKRLLLCGLRSGTVLIYPLAWPQETLCIPPPEGLA
PVLCLALSSQESLLAVAHRDALRLFQVATRDGFPAVEGPLATAPLSPGAPPSHMALLPDR
RLLYGTAGGEVKLHDFSVGVGTDLQPHSSGVTCVTASNWGTHALVGSQDATLRLWALDPV
ALDHTMEYQGLFFQGVLCAAFADSDRFVFTGSQDRTIKVWDVASGKLLCVQFVYSPVVRM
LTFRNGFVGLTLQGRVVQEAFRCPDRVEPDHNPLRNIKARYRVTSREKGGAGQRTCSTDL
QDFNPAQFSLNLVSMLSSRPSSACVLL
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggacggggaacaaagctccggtgtgcaggacatcctgaggggacgctgccaaggagct
cagaggaccggcagcaacatgatccggatcttcatcagctccagcttcacagacatgagc
gttgagaggaaggttctgctagagaaagcgtttccggaggtccggtcgttctgccgcagt
ctgggtctggtctttgaggtggtggatctgagctgggggatccggaccttcccgtatgga
gaccatgaggtcggtgagatcttcctgcaggagatccagacgagtcagaaggtttctgct
ggaccggccttcgtgggcctgctggggaaccggtacggtcaccgacctcttcctcgtctc
atcccagaaaagcagtttgaggttcttctgtccaagctgtccaagaacccagaagctgtt
cagcagctgcaagagtggtttcggaaggacaacaactctgtgccacccacctacgttctc
cagccaatcactgcacgattcccgcactacaatgacctccgacctgaggtggcaaagctc
catgacgatgaccttctgtcctggcacgtcacggagagtcagctgctgcaactgctacgg
tctgcggccgctgaggctgagacggctggagacatcacggccgagcagaagcggctcttc
tactcatcaggtgagacgtgtcctccggcatggacatgtcccagagcttgtccttttggt
ccaggaggactaacgtttcctgcttctcattcagtcacagaacgggcgctagaggagggc
gtctggaaggacaactgccaaatgtccgccttgctcttcgtccgcgagattcctcggcaa
aggatgaagaacggagccaaacgtctggccaagttcatggacctcactgcggatgggctg
ctggacgctgaagctcaggagttgctcaccggcctgaagtcacgtctgtacgccacgtcc
aagaagatcctcaacctacactgtgtggagctgaacaaaggaagcattgacccaaaacga
aaggaacacgccgagtacctggacagcatctgccagcagttcatctcccagatgacgacc
caaatcagcgaggcggtcaaactggcaggagaggacaggaggaagatctggggaagcaca
gaggaggatgaggaggagtttgactgggtggtcgaagaggcgaggcagcacaccatcatg
gctgccgagttgagcaagagtctccagggcagagatgggcttctggggaagatctgcctc
gcaatgtgggagtccagcccagtccaccacagtccgctggtggttcatggtgctgctggg
atggggaaaaccattctgctgtgcaaactggcacaggagatgcagggtgtcctggaggcc
aaggcggtgctggtaattaggctgctggctgccaatcatcctcagagaccaagcatcaac
catgtcctccacagcgtctgcctccaggtgtgtctggcgtgtggcctggctccgcatccc
ctgctgtcagtcagctctcacctggagctgcagcggctcttccagaacctgctggaggag
gtttctcagcaggggaacactctgctcctcatcctggactccctggagcagctggcagac
caacatcaggctcaccagttgcgttggctgcccacagacgtgcctccaaatgtccacctg
ctagtctccatggaaaccactagcgagctgttcgccagcacgcggctgaggctgggcgct
gcaggaaacctctttgaggtggagcgtctgtctcgtgatgaagggcagcagatcatggag
tcccatctgcaggcggctcagcgaactttgacccgggagcagaaggacgcggtgctgcag
agtttccacgcctccggctctcctctccaccttcagctcatcctgtctgctgccaagcac
tggacatccttcacaccaacaacgcagctgctgctgggttccagctcagaggaagtgatg
tcacagctcctcctgaagcttgaggagaaacatgggaaggagctggtgggcggggccttg
ggatgcatcgtgttggcaaggaggggcctgatggaggcggaactgcgtgatgtcatgtca
ttggacgatgatgtcatcagtgaggtatacaggtattccctgcctccgacaccttcgtta
atccggatgccacccatcctgtgggcgcggctcaagcaggacctgcaggaccagctggag
gtccagtggactgacggagttgccatgctggccttcagcagccggcttctctcagaggta
gtcaaagcccgctatctgacgccagagcgacaggggcggatccacaggatcctggcggag
tatttcctgggtcgttggtccggaagactgaagccagtggctcttccgggtctgacgctg
ctgctgtccgaccggaaggtcccgccacagccgctgtggtttgctcctggattggcgaac
gtccggaagctccaggagttgccgtatcacttggtgcatgccggtctgtgggaggagcta
cggcaggaagtagtaggcagcgctgagtggctctactgtcagagccgggtttgtggggtg
tccagcctgatcagcgacctggatcagtgctcccagtacatggactgcagtgaaactgga
ctggtccgtgaggctctggtcctgatgaagcccggcctggacatcctgtcaggccacatg
gaccggtctgtgttttactccgagctgctggcccgactctcctccctggcctccaccttc
cgcaccgtgattggtcggctctgcagccagtgcgacgattggctccaaacgtgtccggag
ccggttctgatcccgaggagcaccttcctgcagcagccagggggggcgctgcagcacacg
ctgactgcaccccacggaggcgtgctctgcttggccgtgggcgcggcgctgcggctgctg
gtcaccgggtcggccggcggcgtggtggcggtctggagcctccgggacaaacatctccag
caggttctgcagggaccgtcagcggccatcttgtcggtaaagatcattgaaagctccgcc
cactgcctctcattggctgcagacggctccctgaggaggtggagcttaaagagcggccag
cagctgttctgcatccaggaggcggggcctgctggctccgccccttccgcggctcgtctg
caggtgtcggaacagctgctgtttgtccacacctggatgcaggtgaaggtctggaagtcg
gacggaaccgagatccacagcgaggacgactcgttggttttgggagttctgggagatgtt
gtggtttctctgcatgacttggaccgggtcagaatctttgacccggtcactgggagccag
acgatggtgcggctgacccggagcctgactccagtgatttctgtgagctctcctaaatgt
gggtcaatatttgtggtgtcggaagacgggatcctgcatcagatctccaggacaggacag
caaaccgtcgcagagtttcctcggcttccgtctcttttctcagcttcggaggacgagaag
atcctgatagcaggatgggagcggactctgagcctgttccgcgtctgcggcgactctgtg
gacggattcctggagctgcagcacgacgatgaggttttatcggcctgcgtgtcgccggac
agccgacgcgtcgtcactggagcggcggatcagctgatccgaatctggtcggtgaccacc
ggccgcctgctggacgctctgagcggctgcagcgctccggtcacctccctgctgctctac
gaccacttggtggtctcagcctcctcggcggcggattcggtccagctgtggagtttgacc
tacgaccccagccacaagcccctcccccacatcccggcaggctccgcccactcagccgtc
accagagacggagatcaggtgttctacgtgcgccaccagaaccagagggaagtgctgagc
tggaacaaccgcacaggttccgtgtcggagcgcctgccagtgtctgcggaggtcagctgc
ctggagctggcgcagcagaagcgcctcctgctgtgcggcctgcgtagcggcaccgtgctg
atctacccgctggcgtggccccaggagacgctgtgcatcccgcccccggagggcctggcc
ccggtgctctgcctggccctcagctcccaggagagcctgctggccgtcgcccaccgggat
gcgctgcgcctgttccaggtcgccaccagagacggttttcctgccgtggaggggcccctg
gcgacggccccgctctcgccaggggcccctccatcccacatggcgctgctgcccgaccgc
cggctgctgtacgggacggccggcggcgaagtgaagctgcacgacttcagcgtcggcgtc
ggcaccgacctgcagcctcacagctcgggggtcacctgtgtcactgcaagcaactggggg
acgcacgccctggtgggctcccaggacgccacgctgcggctgtgggccctggacccggtg
gccctggaccacaccatggagtaccagggccttttcttccagggtgtcctctgcgccgcc
ttcgctgacagcgaccgcttcgtcttcactggatctcaggaccgaaccatcaaggtctgg
gacgtcgcttcagggaagctgctgtgcgtccagttcgtctactcgccggtcgtccgcatg
ctgaccttcaggaacggcttcgtgggcctgaccctgcagggccgcgtcgtccaggaggcc
ttcaggtgtccggaccgggtcgagccggaccacaaccctctgaggaacatcaaggcccgg
taccgggtcacctccagagagaagggcggggccggccagcggacctgcagcaccgacctg
caggacttcaacccggcccagttcagcctgaacctagtgagcatgctcagtagcaggccg
tcctccgcctgcgtcctgctgtag
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integrated database retrieval system
