Xiphophorus maculatus (southern platyfish): 102233271
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Entry
102233271 CDS
T02923
Name
(RefSeq) paraspeckle component 1 isoform X1
KO
K24993
paraspeckle component 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102233271
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102233271
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GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_occluded
RRM_5
Spo16_C
Motif
Other DBs
NCBI-GeneID:
102233271
NCBI-ProteinID:
XP_005810262
Ensembl:
ENSXMAG00000007929
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All DBs
Position
24:9767655..9786064
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AA seq
514 aa
AA seq
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MANRNMHQARMPGANSPQPGRRGTDSPASSEPTPANKGSPAPPQQQSPAADQSEGAAEET
GECPSKMTLDIASFRKPGEKTFTQRSRLFVGSLPLDITEEEFRNLFAKYGNINEVFINRE
RGFGFVCLETRTLAEIAKVELDGSVLSNRALKVRFATHGAALKVRNLLPVVTNELLEEAF
SQFGPVERAIVVTDDRGRSTGRGIVEFASKVAARKALERCNEGAMLLTTTPCPTIVEPME
HLDDEDGLPEKILPKTPKYYKEREQTPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRN
IKEAREKLEAELEAAKNEHQLMLMRQDLLRRQEELRRLEELRNQELQRRKQIEMRHEEER
RRREEEMMRHREQDELRRQPDGGGFVPNYHENREQEMRVGELGPRGAGNMGDGFNQASGG
PSGNQGQMMGGSGRGGAIAPEGTSNMGTPLMSENGAMRNDRYSQGGSMGGRSEVESPKQQ
QQPLGPQGGPAPGYSRGSPSPGVFDGPNNKRRRY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgaaatatgcaccaagcgaggatgcctggtgctaactctcctcagccgggg
aggagagggacggactccccggcctcgtcggagccgacgccggcgaacaaaggcagtccg
gccccgccgcagcaacagtctcccgcggccgaccaaagcgaaggagccgcggaggaaacg
ggggaatgcccgtcgaaaatgactctggatatagcaagttttcggaagcccggagagaag
acgttcacccagcgctcccgcctctttgtcggcagcctgccgctggacatcacggaggag
gagttcaggaacctgttcgctaaatatgggaacattaacgaggtgttcatcaacagggag
cggggatttggattcgtttgcttggaaacccgaactctggcggagattgctaaagtcgag
ctggacgggtcggttctgagcaacagagcactaaaggtccgcttcgcgacgcacggagcc
gcactcaaagtccgcaatctgctgccagtggtgacaaacgaactccttgaagaagcgttt
tctcagtttggacctgtggagcgggccattgttgtgacggacgaccgcggccgttccact
gggagaggcatcgttgagtttgcaagcaaagtcgccgcccgtaaagccctggagcgctgc
aacgagggagcgatgctgctgacgactactccatgtcccaccatcgtggagccaatggag
cacctggacgatgaagatggtctacctgaaaagattctgccaaaaactccaaagtattac
aaagagcgggagcagacgccccgattcgcccagcctggcacgttcgagtttgaatacgcg
tctcgctggaaagctctggatgagatggagaagcagcagcgggagcaggtcgaccgaaac
atcaaggaggccagagagaaactggaggcggagctggaggccgccaaaaacgaacatcag
ctcatgttgatgagacaagatctattgagacgtcaggaggaactgcggcggctggaggag
ctgcgaaatcaggagctgcaaagacgaaagcagatagaaatgaggcatgaggaggagcga
aggaggagagaggaggagatgatgaggcacagggagcaggacgagctgagacggcagccc
gacggcggcggcttcgttccaaactaccatgaaaacagggaacaggaaatgagagtgggt
gagctgggccctcgtggagccggtaatatgggagatgggtttaaccaggcctctggaggg
cccagtggtaaccaggggcaaatgatgggcgggagtggaaggggaggagccattgcccca
gagggaacgtcaaatatggggacacctttgatgtcagagaatggagccatgcgtaacgat
aggtactctcagggcggatcaatgggcggtcgatcggaagtcgagtccccaaagcaacag
cagcagccattggggcctcagggtggaccagctcccggatatagcagaggcagtccaagt
ccaggagtctttgacggcccaaataacaaacgccggcgatactaa
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