Xiphophorus maculatus (southern platyfish): 102233282
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Entry
102233282 CDS
T02923
Symbol
hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102233282 (hmbox1)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102233282 (hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_TSHZ3
DUF494
AbiJ_NTD3
HTH_24
HTH_37
HTH_31
NOC3p
Motif
Other DBs
NCBI-GeneID:
102233282
NCBI-ProteinID:
XP_023203506
Ensembl:
ENSXMAG00000001795
LinkDB
All DBs
Position
15:complement(20668965..20688862)
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AA seq
512 aa
AA seq
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MSDFSEEPRFTIEQIDLLQRLRRTGMTKQEILHALDTLDRLDREHGDKFGRRTSSSSSSS
STYLVGGANSSAAKTTATSFNNNATASATTTTTTSSSSATCNGGEGGDHSSSSSLVVVAA
AVASSTTSKISTATQTQFNNSGGGLSPSPSNSYDTSPPPGPPPPSAVLPSPVALVVLSQN
GRDSLAATPNGKLSPPRYPVNSAAASRAFGFEAAEEDLDVDDKVEELMRRDSSLVKEEIK
AFLGNRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYILEKTTPGATLNM
RPAPLPLEEMEWRQTPPPLATAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKRE
EIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSP
GGHSNSDDIDGNDFAEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDGAAHNEHQDPISL
AVEMAAVNHTILALSRTGGVPNDIKTESLEDE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcagcgaggagccgcgcttcaccatcgagcagatagacctgctgcagagg
ctgcgtcgcaccggcatgacgaagcaggagatcctgcacgcgctcgacactctggaccgg
ctggaccgggagcacggtgacaagttcggccgccgcacctcttcctcctcttcctcctcg
tccacctacctcgtaggcggggccaacagctccgctgccaaaacaaccgccacatccttc
aacaataacgccactgcctcggcaacaacaaccaccaccacctcttcctcttcggcgacg
tgcaacggcggcgaaggcggcgaccactcctcctcctcctccctcgtcgtcgtggccgcc
gccgtcgcctcgtccaccacctccaagatctccacagccacgcaaacgcagttcaacaac
agtggcggagggctgtccccgtcgcccagcaacagctacgacacgtccccgccccccggg
ccgccaccaccctcagctgtgctgccatcgcccgtggcgctggtggtgctgtcgcagaac
ggacgggacagcctggccgccacgcccaacgggaagctgtccccgcctcgctacccagtg
aacagcgcggcggcgtccagggcgtttggcttcgaagccgcagaagaagacctggacgtg
gacgacaaggtggaggagctgatgagacgggacagcagtctggtcaaagaagaaatcaaa
gctttcctggggaaccggaggatttctcaggctgtcgtggctcaagtgaccggcatcagc
cagagcaggatctcccattggctgctgcagcacggctccgacctgagcgagcagaagaag
agggctttctaccgctggtacatcctggagaaaaccacgccaggtgccactctgaacatg
cggccagcgccgctgcctctggaggagatggagtggaggcaaaccccgccgcccctcgcc
accgcccccggaaccttccggctgcgtcggggaagccgcttcacctggaggaaggagtgc
ctggctgtgatggagagctacttcaatgacaaccagtacccagatgaagccaaaagagag
gagatagccaacgcctgcaatgctgttattcagaaaccagggaagaagctgtctgatctg
gagagggtgacctccctgaaagtctacaactggttcgctaaccggcgcaaggagatcaag
agacgagctaatattgaagcaacaatcctggagagtcatgggatagacgttcagagtcca
ggtggacactccaacagcgacgacatcgatgggaatgactttgcagagcaggcctgcgac
ctgccctacttcgacaagagacctctcagccgaccgtttggcctttaccgcctggagccc
acctcacctacacaggacgacggtgcagctcacaacgagcatcaggaccccatctctctg
gccgtggagatggccgccgtcaaccacaccatcttggcgctgtccagaaccggaggcgtg
cccaacgacatcaagaccgagtccctggaggatgaatga
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