Xiphophorus maculatus (southern platyfish): 102233347
Help
Entry
102233347 CDS
T02923
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X2
KO
K06767
Down syndrome cell adhesion molecule
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102233347
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
DSCAM family
102233347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
C2-set_3
fn3_2
Interfer-bind
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
102233347
NCBI-ProteinID:
XP_005805979
Ensembl:
ENSXMAG00000016834
LinkDB
All DBs
Position
18:complement(15327951..15466665)
Genome browser
AA seq
2067 aa
AA seq
DB search
MWILAFTFLQSILNVFGEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVSVVSWEKDTVSLSSGQRYLITSTGA
LYIVDVLPEDGLNNYRCTTRHRYTGESRQSNSARLIVSDPTNAEPAILDGFDHKEVKINH
RVQLPCKASGFPTPKYRWLKDNSPLEPDSRFRQTISGLLIENAQPSDSGTYVCEVWNSYG
NAEVMGRMYVKQPLKAMVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNSV
RFTGLNRENIIIEGMTKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVNP
KEPLSLVCNVKGTPPPRCSWSLDDDPVIKDAHHHLGHYETHEGHVVSQLNVTHTQVPDGG
LYRCTCSNSAGVVYHQARINVRGLASIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKN
SVLLPFNHRQRAFENNGTLKLSNVQQVDAGEYNCRVMVQPNKMENQSVHVQVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPASLGVTVDNIDFTSSLRINNLTP
DHNGNYTCIARNEAAVVEHQSQLIVRVPPQFVVQPENQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPILLNSGSRIQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKKMSCTAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVISTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLEPTSPQSIKVSWKPPQKHLQNGVIRG
YQVGYREYSPGGSHQFTIISVDSTGDTTESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRSPENVLAVAKSPEVISLSWMSLPRESLNGNLQGYRVIYWANLPDGELG
EIRNVTTDQPSLELNGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ANSSSAVFVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDKYFYMIPNLVRNRQYS
VWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPTIK
WLKGNTNGTPTPVIVDGRRSVQGNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKEHEIFTSINSTRARLNLA
GWNNGGCPITSFILEYRAVDSATWTTAQRTSLTKSYILYDLQEATWYELQMKVTNSAGSA
EKRVTFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSVLVVAVLVFIMLMVLK
RRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAK
AGPAAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDR
ARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTD
SLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGV
PLPARGGGVSSSSGSSSSGGGGAGAAGPSGGGVGAAGESRGAMGQACLEPQRSRTLKRPP
PMEPTPMEVPSPREVQQWQPGTASTLPHRDVRERGEARGEVRGEAPPSGDLAQAQAAKLS
TSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttaccttcctccagagcatcttgaatgttttcggtgaagatctg
cattccagcctatactttgtcaatgcatctctgcaagaggtagtatttgccagcacaacg
gggacttcggttccctgtcctgctgggggagcgccgcctgcttcgctgcggtggtatttg
gctaccggagaggagatctatgatgtcccgggcatccgccatgtccatcctaatggaact
cttcaaatcttcaacttcctgccatccagcttcagcaagctgatccatgacaacacatat
tactgcactgccgagaatccttctggcaagatcaggagccaggatgtccacatcaaagct
gtttcacgggaaccctacacagtcagagtggctgaccagaaggctatgcgaggcagtgtg
gccgtcttcaagtgcattatccccgcttctgtggaggcctatgtctccgtcgtatcatgg
gagaaagacacagtttcactcagctcaggacaaagatatctcatcacatctacgggagcc
ttgtacattgtggacgtcctgcctgaggatggcctaaataactaccgctgcacaacacgc
caccggtacaccggtgagtcacggcagagcaacagcgcgcgtctcattgtgtcagacccc
accaacgctgagccagccatcttggacggctttgaccacaaagaggtgaagattaatcat
cgagtgcagctgccctgtaaggcctcaggcttccccacacccaaataccgctggctgaag
gacaacagccccttggagccagacagtcgctttcgccagaccatctcaggattgctcata
gagaatgcacagcccagtgactcgggaacgtatgtatgtgaagtttggaacagctatggc
aacgcagaggtcatgggacgcatgtatgttaagcagcccttgaaggcaatggtcagtcct
cgaaaagtgaaaggcagtgtgggtagcaaggtgtctctgtcttgtagcgtgagcggttcc
gatgaatacgagctgtcttggtatcgcaacggagagatcatctaccctggaaacagtgtt
cgcttcacggggcttaaccgggagaacataatcatcgagggaatgacgaaaagtgatggc
ggagcttatcagtgcttcgccaggaagggcaagatgtcggcacaagacttcgtacaggtt
attctcgaagatgggacccccaaaattttatcttctttcagcgagaaggtggtgaacccc
aaagaacctctgtctctagtctgcaacgtgaagggaacgccgcctcccaggtgcagctgg
tcgctggatgatgaccccgtcatcaaagatgcccatcaccacctgggccattatgagacc
catgagggccacgtggttagccagctcaacgtgacccacactcaggtgccggacggcggg
ttgtatcggtgcacgtgcagcaactcggccggggtcgtgtaccaccaggctcgaataaac
gtaagaggcctagcaagcatccgcccaatgaaaaacatcacagcgattgcaggacgggat
gcctttgttcactgccgtgtgattggctacccttactactccataaagtggtacaaaaac
tcagttttgctcccgttcaatcaccgacagcgagcttttgagaataacggtaccttgaag
ttgagcaacgtgcagcaggtggatgctggggagtacaactgcagggtgatggttcagccc
aacaagatggaaaaccaaagtgtccatgttcaggttagagtccctccatacatccagccc
ttcgagtttcagcgcttcactatcggtcagcgtgtgttcataccttgcgtggtcatgtcg
ggcgaccggccgctggatatcacctggcagaaagatggacggccaatccccgccagcttg
ggtgtgacggtcgacaacatcgacttcaccagctcactgcgaataaacaacctgacacct
gaccacaacggcaactacacctgcatcgcccgaaacgaggccgccgttgtggagcatcag
agtcagcttattgttcgagttccacctcagtttgtggttcagcctgagaatcaagatggg
atctacgggaaaactgtgacccttaactgctctgctgaaggctatccgccacccactatt
gtttgggaacactccaaaggtgccggcgtcccccagtttcagcccatccttctgaacagc
ggctctcgaatccagctgctgagcaacggctcgctgcttatcaaacatgttctggaggac
gacagtggcttctacctgtgtaaggtcagcaacgacgtcggagctgatgtcagcaagtcc
atgtacctcaccgtcaaaataccagccatgatcacctcctacccgaacaccactctggcc
acacaaggcgaggagaagaagatgagctgcaccgctcacggggagaaacccatcatggtg
cgctgggagaaagaggagcgaatcatcaaccccgagaccagccgatacgtggttactgtc
aaggaggtggctgacgaagtcatctcaacactggtgatcatgccaactgttcgtgaggac
tcagggttcttctcctgtcatgccatcaactccttcggtgaggacagaggcatcatacag
ctgacagtgcaagaaccacctgatcctccagaggtggagatccgggaggtgaaagatcga
accatagctctccgctggaccatggggtttgatggcaacagtcctatcacaggatatgat
attgagtgcaagaataaatcagcttcttggttgtcagcccaggtaaccaaagatgtgtca
ccacagcttaaccaagccactattatagacctccatccttcctccacctacaacatccgc
atggttgccaaaaacattattggcaacagcaaccccagcaacgaactcaccatcactact
gatgaagcagctcctgacgggcctccacaagatgtcactctggagcccacgtccccacag
agcatcaaagtgtcttggaagcctccccagaagcatctgcagaacggtgtgattcgcggc
taccaggtgggctacagggagtacagtcctggtgggagtcaccagtttactattatcagc
gtggattcgacaggagacaccacagagagcatcgtgttggacaacctgaagaagttcact
cagtacagtgtggtggtccaggctgcaaacagagctggaacaggaccatcttcacagcag
gtggtaaccaagaccctggaggatgtgccgtctcgatctcctgaaaacgtcttggcagtg
gccaagtctccagaggtgatttccctgtcctggatgtctctgcccagagaatctctcaat
gggaacctgcagggctacagagtaatctactgggccaacctgcctgatggagaattgggt
gaaattaggaatgtgacaaccgatcagccgtctctggagctgaatggtttggagaagtac
accaactacagcatccaggtcttagccttcactaacgccggagacggagtccgcagtgaa
cagatttatgttcgaaccaaagaggatgttcctggtccaccagcaggagtgaaggctgcg
gctaacagcagctcggctgtgtttgtctcctggctgcctccacttaaacttaatggcatc
atcagaaaatacattgtcttctgctctaacctgcatcccatggtgatgagtgagtttgag
gcttctcccgataaatatttttacatgatcccaaatttggttcgaaacagacagtacagc
gtctgggtggtggcagtgactgctgcagggcatggcaacaacagtgagaagatcacagta
gagcctctggctaaagctccagctaggattctgacgtttaatggcacagtcaccaccccc
tggatgaaggacattgttttaccttgcaaagctgtcggggaccctcctcccaccatcaag
tggctcaagggaaacacaaatgggacacctacacctgttattgtggatggtcgccgtagc
gtccaggggaatgggagcttcattatccgcacagtgaaagcagaggactctgggaactac
agctgtgtggccagtaacaactgggggtcagatgagatcacactgaacctgcaggtccaa
gtaccccctgaccagccacgtctcacggttaccaagactaccaccacatcaatcacgttg
tcatggatacctggagacaacggcgggagctctatcagaggttacattctgcagtactca
gaggacaacagtgaacaatggggcagttttcccatcagccccagtgagcggtcatatcgt
ctagagaacctgaagtgtggcacatggtacaaattcaccctgacggcccagaacgccgtg
ggcccaggacgcatcagcgagatcattgaagcaaaaacccacgggaaagaaccacaattt
gccaaagaacatgaaatcttcaccagcatcaactccacccgggccaggctcaacctggct
ggctggaacaatggcggctgtccaatcacctccttcatactggaataccgcgcggtggat
tcagccacatggacaacagcccagcgcacctcgctcaccaagagttacatcctgtacgac
ctgcaggaggcgacatggtacgagctgcagatgaaggtcaccaacagcgccggctccgcg
gagaaacgggtcaccttcgctactctaaatgcggatggaagtaccatccctcctctgctg
aagacaggagatcccatctcagacaacatgtcaggcagcggagggctgaagatggtggtg
accatcacctccgttctagtcgtggctgtgctggtttttataatgctaatggtgctaaag
aggagacggagggagcaaaggctcaaaagactcagagatgccaaaagcctggcagaaatg
ctgatgagtaaaaacacacggacgccagacacggtgaacaagcagcagcagacactgaga
atgcacattgacatccccagagcgcagctcctcattgaagagcgggacacaatggaaaca
atcgatgacaggtccactgtgctgctgacagacaatgattttggggagaccaataagcag
aagtcttccacggtgacccacacagtccactaccagtctctgtcccaggccactgggccc
ctggtggacgtatccgatgccaggcctggaaccaaccccactgccagacgcactgccaaa
gctggacctgctgcagcacggagccgctacgccagccagtggactctgaaccggccgcat
cccaccagctcctcacacaccctgaccactgactggagactccccacaccccgcgccact
ggatctgtggacaaagagagtgacagctacagcgtcagtccctcacaggacacagatcgc
gcacggagcagcatggtctcaacagagagtgcatcttccacctacgaagagctggcaaga
gcctatgagcacgccaagatggaggagcagctccgtcatgcaaagttcaccatcacagag
tgcttcatctctgacacgtcgtccgagcagatgacagcagggaccaacgactacaccgac
agcctgacctccagcacaccatcggagtcgggcatctgccgcttcaccgcttccccgccc
aaacctcaggatgttagcagggtcatgaacatggccgtgcccaaggcgcacagaccagga
ggagagttggtccacttacctccgtacctccgtatggacttcctgttgaaccgtggcgtg
cctctgccagcccgaggagggggggtcagcagcagtagtggcagcagtagcagcggggga
ggcggtgcaggagctgcaggaccgagcggaggtggtgttggtgctgccggggaatcaaga
ggagccatgggtcaggcctgccttgaaccccagaggagtcgtaccctaaagaggcctcct
ccgatggagcccacacccatggaagtgccctctcccagggaggtgcaacagtggcagcca
ggaactgcctctacccttccacacagggatgtccgggagaggggggaagcccggggcgag
gtccgaggagaggcgcccccctcaggagatttagcccaagcacaggctgccaagctcagc
acctcacaggagtcactgctggattccagaggacacctgaaacagagcaacaacccttat
gccaagtcttacactctggtataa
DBGET
integrated database retrieval system
