Xiphophorus maculatus (southern platyfish): 102233367
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Entry
102233367 CDS
T02923
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102233367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xma04091
]
102233367
Lectins [BR:
xma04091
]
C-Type lectins
Lecticans
102233367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Motif
Other DBs
NCBI-GeneID:
102233367
NCBI-ProteinID:
XP_023194698
Ensembl:
ENSXMAG00000013988
UniProt:
M4AHU9
LinkDB
All DBs
Position
9:31306731..31353954
Genome browser
AA seq
2047 aa
AA seq
DB search
MASVGAVPVLLLLLVSASSSLFMVKVNPGVQVLRGRSVSITELDLEIQVDPSSDCKVEVV
LNEPVTQWVGKLTPQMFDCSFLKDEVRYVHNGSPLLDEDSVLLRVYRFTASHMQVETVVL
RVKVVDGGSSVVELGGSPLVVPRFFGLSNALNSTVLNIRTQEDLVCTVRLMTAETKFPTI
GRLVNRDNSGLRRGRQVEEVCPGNKLCLHHTTEVQFLKTSCQNFLSSGLRYQHLSPPSPD
TDYIPIRVELREKATRKLLESQALWLPVLIQGAVQNQPPKPGFVASSVLEVDQFILTPLS
TATLDATDPDTPQDRLVFNVTAPPAEGFITHLEDHTRPVGSFTWLDLHDMKVAYQPPNSS
QSLRRSLQVEFQAIDCFFTSSSSILVHLSIRMSETNAPRVSWNMGLDLLEGQSRPITWEE
LQVVDKDNINAVHLVAVDGPAHGRLSVRGVKAFMFQVRDLKEGVVIYHHSDSDSTRDHII
FRISDGHHSIRHKFPINILPKDDSPPFLINNVAVEVPEGGAVRLQEYLLLATDTDSSDDL
ILYQMVSAPRAGWLVRKSSTHQTGVSVDGFLQKDLIQGQIYYQHSGDETFEDSFDILLSD
SHQPPNLSQTYTVVVHVFPVKDLLPVEAPGTVRSLVVRETEVVHVSQSQLHFTDRENPDS
DLTYIITQSCFSPLQPGLMDAGRLFYADSSSYLKKDPTVPGLKSFTQHAVNHMKVAFMPP
VEDIGPDPLFVQFAFSVSDPHGGTVSGLVFNITVTPVDNLPPEAFTNLLRVEEGGAAFVT
EEHLLVQDQDSPEEELRVEVQKMARHGWLELQGGVLLQGGEFRLPDLRGLQLRYIHDDSE
TRGDEVGLKVTDGQNSKVVVLQVQVRPMNDEPPRLGGGLRTSLSCEEGGRVQVTADFLSA
TDQDGDDSRLTYMLARSPGRGELQRAGGKTDKFSQQDLLQGHVYYVHSGAEIGPGPVFDT
VTLIISDGEAGVMDDCCHGDVPPPPVPLHGTLPVYDLNITVLPVNNKVPEVTLGQSLLLV
DEGSRACLCGGVLGASDPDSLPQDLTFHLEAPPLHGFLENVLPMPGSEKSGVGIPIESFS
LTHLTLGFIRYVQSEHRGVEPTADQMSIRVSDGTFSSAPVPFYIIINPTNDEPPSLLLAN
FTVKEGGVKELTPPTLDACDLDVPADLLTFHVERPPSHGQLVHNMQGGAGARVMTFTLQE
LRQGMTVLYVHDDSDTLEDGVLLQLSDGVHSVGGSAWVTVLPVNDNMPHLVRNTGLDLDS
GERRVISGAVLEAADLDTPAHQVFFFINTAPRFGKLLLKTESSWTDLEAGQNFTQEQVEM
NRVWYHHRTSSVGFRGQDSFRFILSDEDNKSPIQSFLISIRTVDSGEIVLQTRPVRLREG
QRLVLNTDVLMALDSAGRPEDLVFAVSGPPRHGLIHAARRPGHPLTRFTQLDVAAHRVCY
THSNDHDSDADSFSFVITNGASSRAGTLLFTIERSDRIPPTLSSNAGLRLQDGSIAAVTP
DLLRLTDPDTVASNLTFVVTLLPRYGKLLLRGAPMPSPPRFLQSDIDQLDLAYRHVPGSP
ARPDRFCFLPSDGTNKGYLEFGQLKEEPAVFSIQVEQVDRVAPSLDRLDNPSTVTDLGAG
RYGIFITSRHLRGSDPDSPAELLEFSIITPPQFGSLENAATGSTISRRFTQRDLDRRSVL
YVVPVDVDVTADGFWFRLVDPAGNEAPPHRLELFWSRVQLSASCYRTCETSGTLQIQIQR
GGRSADPAYVSIQVEEGSAKAGRDFTHSSAALIQFDTGVNVKTWSVFPLDDGLEENHEAF
SVALRNPQNAVMGQRNTAAVEIIDPRSGRCDPEDLKVLSPPLPPQPEEEEDEDPVTDIEA
ELLWEKQPHPPRGDVPDRRPSLDEAEPQDQALPGDTHSSEGRLQGARTGSTGLRKVLTLP
SLCPEGWTAYRGRCHMVSRSVASWASAHRTCSLLFNSSLSSVRSRKDAAWMWRLAGRKSF
WIGQSGGHDLWVWDESHSAKLRGAPASRDEAGFSSDCVLVENPRRWIPTNCSAEAQHSFI
CSSETPP
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtcggagcggttccagtcctgttgctcctcctggtgtcggctagcagctcc
ctcttcatggtgaaggtgaaccctggtgtgcaggtcctccgaggtcgctcggtgtccatc
actgagttggacctggagatccaagtggatccaagctccgactgcaaggttgaggtggta
ctgaacgagccagtgacccaatgggtggggaagttgactccacagatgtttgactgcagt
ttcctgaaggatgaggtcagatacgttcacaatgggagtcctttgctggacgaggactca
gtgctgctccgagtgtatcggttcacagcttcgcacatgcaggtggagacagtggtgctc
agggtcaaggtggtggatggagggtccagtgtggtggagttgggcggcagtcctctggtg
gttcctcggttctttggattgtccaacgccctcaacagcaccgtgctgaacatcaggacc
caagaggacctggtctgcaccgtcaggctgatgaccgcagaaaccaagttcccaacaatc
ggccggctggtcaaccgggacaactcaggtctccggagaggccggcaggtggaggaagtt
tgtcctggaaacaaactgtgtctccaccacaccactgaggtccagttccttaaaaccagc
tgccagaacttcctgagctccggtctgaggtaccaacacctcagtcctccgtcccctgac
acagactacatcccaatccgggtggagctgagggagaaggcaactcggaagctgctggag
tcacaggcgctgtggctgccggttctgatccaaggcgcagtgcagaaccagccccccaag
cccggcttcgtggcctcttccgtcttggaggtggaccagtttatcctcaccccgctcagc
accgccacgctggacgccaccgaccccgacacaccgcaggaccggctggtgtttaacgtc
acggcgccccctgcagagggcttcatcacacacctggaggaccacaccaggccggtcggg
tccttcacctggttggacctgcatgacatgaaggtggcctaccagccccccaacagcagc
cagagcctccgccggagcctgcaggtggagttccaggcaatagactgtttctttacgagc
agctcgtccatcctggtccacctgtccatcaggatgtcagaaacaaacgcacctagagtc
tcctggaacatgggtctggacctgctggagggtcagtcccgaccaatcacctgggaggag
ctgcaggtcgtggacaaggacaacatcaacgccgttcacctggtggctgtggatggaccg
gcgcacgggcgcctcagcgtcagaggtgtgaaggccttcatgttccaggtgcgggacctg
aaggagggcgtggtcatctaccatcactccgacagcgactccacccgtgaccacatcatc
ttccgcatcagcgacggccaccacagcatccgccacaagtttcccataaacatcctgcca
aaggacgactccccgcccttcctcatcaacaatgtggcggtggaggtgccggagggcggc
gccgtgcgactgcaggagtacctgctgctggccaccgacacggactccagcgacgacctc
atcctgtaccagatggtgagcgcccctcgcgcaggctggctggtcaggaagagctccacc
caccagacaggcgtctctgtggacggcttcctgcagaaagacctgattcagggtcagatc
tactaccagcactcgggagacgagacctttgaggactcctttgacatcttgctctccgac
agccaccagccgcccaatctgtcgcagacatacacggtggtggtccacgtgtttccggtg
aaggacctgctcccggtagaggctcccggtaccgtccgatctctggtcgtcagggagact
gaggtggttcacgtctcgcagtctcagctgcacttcacagacagggaaaatccagactct
gacctgacctacatcatcacgcagtcctgcttcagcccactccagcctggactgatggat
gcaggtcgtctgttctacgcagacagcagcagctacttgaagaaggacccaaccgttccg
ggtctgaagtccttcactcagcacgctgtcaaccacatgaaggtggccttcatgccccca
gtggaggacattggccctgacccgctctttgtccagtttgcgttttccgtcagtgacccg
cacggcggtaccgtctctggcctagtcttcaatatcacagtgacccccgtggacaacctt
ccacctgaggccttcaccaacctgctgcgagtggaggagggcggcgcggcctttgtcacg
gaggagcacctcctggtccaggaccaggacagtcctgaagaggagttgagggtggaggtg
cagaagatggcacggcacggctggttggagctgcagggtggggttctgctgcagggaggc
gagttcaggctccctgacctgagaggtctgcagctcaggtacatccacgacgactcggag
accagaggagacgaggtgggtctgaaggtgacggacggtcagaactccaaggtcgttgtg
ctacaagttcaggtgcgaccgatgaatgacgagcccccccggctgggtgggggcctgcgg
acatccctgagctgcgaggagggggggcgggtccaggtgacggcggacttcttgtcggcc
acggaccaggatggcgacgactccaggctgacctacatgctggcccggagtcctggccgg
ggggagctgcagagagccggcggaaagacggacaagttctcccagcaggacctgctgcag
ggacacgtctactacgtccactcaggtgcagagatcggacccgggccggtgtttgacacg
gtcaccctcatcatctctgacggagaggccggagtgatggatgactgttgccatggagac
gtcccgcccccacctgtccctctgcacggcacgcttcctgtttatgacctgaacatcacg
gttcttcctgtgaacaacaaggttcctgaagtcactctgggtcagtccttgctgctggtg
gatgaaggctccagggcctgtctgtgtgggggggttctcggggcctcagacccagacagc
ctcccccaggacctgacctttcacctggaggctccgccccttcacggcttcctggagaac
gtgctgccgatgccaggctcagagaagagcggcgtaggaatacccattgaatccttcagc
ctgacccacctgactttgggcttcatcaggtacgtccaatcagagcacagaggggtggag
ccgacggcggaccagatgtccatcagagtgagtgacggcacatttagctccgcccccgtc
cctttctacatcatcatcaacccgaccaatgacgagccgccttccctgctgctcgccaac
tttaccgtgaaggaaggcggggttaaggagctgactccgcccactctggacgcctgtgac
ctggacgtcccggccgacctcctcaccttccatgtggagcgccccccgagtcacggccag
ctggtccacaacatgcagggcggggcgggcgcccgggtcatgaccttcacccttcaggag
ctgcgtcaaggcatgacggtgctgtatgtacacgacgactcggataccctggaggacggc
gtcctgctgcaactgagcgacggcgtccactcggtgggggggtccgcctgggtcacggtg
ctgccggtcaacgacaacatgccacacctggtcaggaacaccggactggacctggactct
ggggagcgcagagtgatctccggtgcggttctggaagctgccgatctggacacacctgct
caccaggtgttcttcttcatcaacacggcaccaagatttggaaaacttctgctgaagaca
gagtccagctggacggaccttgaagcaggtcagaacttcactcaggaacaggtggagatg
aaccgggtgtggtaccatcacagaaccagcagcgtcgggttcagaggtcaagacagcttc
cgcttcatcttgagcgacgaggacaataagtctccaattcagagcttcctgatctccatt
cgcacggtggattcaggtgagatcgtcctgcagacccggcccgtccgcctgcgggagggg
cagcggctcgtcctgaacaccgacgtcctgatggcgctggactcggcgggccgacccgag
gacttggtgttcgccgtgtccggcccgccccgacacggcctgatccacgccgcacgccgg
cccggccacccgctgacccgcttcacccagctggacgtggcggcgcaccgagtgtgctac
acccacagcaacgaccacgactcagacgccgactcgttcagctttgtcatcaccaacggc
gcctcgtcccgcgccggcacgctcctcttcaccatcgaacgcagcgaccgcatccctcca
accctcagcagcaacgccggccttcgtctgcaggacggctccatcgctgccgtgaccccc
gaccttctgcggctcaccgacccggacaccgttgcctccaacctgaccttcgtcgtcacg
ctgctgcccaggtacggaaagcttctgctgaggggagcgccgatgccttcgccacccagg
ttcctccagtccgacatcgaccagctggacctggcttaccggcacgtgccgggcagcccg
gcgcggccggaccggttctgcttcctgccaagcgatggaaccaacaaaggctacctggag
tttggtcagctgaaggaggagcctgcagtgttcagcatccaggtggaacaggtggaccgg
gtcgctcccagtctggaccgcctggacaatcccagtaccgtgacggacctcggtgccggc
cgctacggcatcttcatcaccagcagacacctgcggggctcggacccggacagcccagca
gaactcctggagttctccattatcacgccgcctcagttcggatccttggagaacgcagcc
acagggtccaccatcagccgacgtttcacccagcgcgatctggaccggcgctccgtcctc
tacgtcgtcccggttgacgtggatgtgacggccgacgggttctggttccgactcgtggac
ccggcgggaaacgaagctccacctcacaggctggagctgttctggtcccgggtccagctg
tcagccagctgctacagaacctgcgagacttcgggaactctgcagatccagatccaacgt
ggtgggcggagcgccgacccggcttacgtttccatccaggtggaggaaggatcggccaaa
gccggccgggatttcacccacagctcagccgctctgatccagttcgacacaggtgtgaac
gtaaaaacctggagcgtcttcccgttggatgacggcctggaggagaaccacgaggccttc
agcgtcgctctgaggaaccctcagaacgccgtcatgggtcagagaaacaccgccgccgtg
gagatcatcgacccccgctcaggacgctgcgatccggaagacctgaaggtactgtctccc
cctcttcctcctcaacctgaggaagaggaggatgaagacccagtgaccgatatcgaggca
gagcttctttgggagaaacagccccaccctcccagaggagacgtcccggaccgccggccc
tccctggacgaggcggagccacaggaccaggcgctacctggagacacccacagctcagag
ggccgcctgcagggagcacgcactgggagcactgggttacggaaggtgttgaccctgccc
agcctgtgtcctgagggctggaccgcctacaggggacgctgccacatggtgagccggtcc
gtagccagctgggccagcgcccacagaacctgctctctgctcttcaacagcagcctgagc
agcgtgcgctccaggaaggatgccgcctggatgtggaggctggcggggaggaagtccttc
tggatcggtcaatctggaggtcacgacctctgggtgtgggacgaaagtcattcagccaaa
ctccggggggcgccggcgagccgggatgaagctggcttcagctcagactgtgtgctggtt
gaaaaccccagaagatggattcctaccaactgctcagccgaagcccagcattcgttcatc
tgttcctcagagacgccgccgtga
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