Xiphophorus maculatus (southern platyfish): 102233432
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Entry
102233432 CDS
T02923
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102233432 (trim65)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102233432 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-B_box
zf-RING_5
Prok-RING_4
zf-RING_11
U-box
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
102233432
NCBI-ProteinID:
XP_005809689
Ensembl:
ENSXMAG00000012681
UniProt:
M4AE04
LinkDB
All DBs
Position
10:complement(19994165..20000920)
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AA seq
513 aa
AA seq
DB search
MDSQNSYLNCAICLERFSYPVTIPCGHTFCKDCISTHWDTSSKSNKSPHCPFCNQEFASR
PVLKRNVSLSVLAESANSTGPSCREPLLRSGDGARTLLLCDRHKKPLVYYCRQDKMPVCC
ECGITECANHDKVMLEAEKESQELLLERKSKEVEKRLEDTQKSINDLVENISHAKVTLEQ
TSSWMRAKFSSLIKILTEKQEATELFIEQQKQEAITEAQTRLACLQQRLQILQVSQAQIA
ALHDLSDADLIRESTRVEVPRFSDVPTEVSPSLLDRLNGVTDVLTRVSKLVSEDLERAVC
TTVLQDNDGSPQDKRPVLAVVPSPATPCLPGGKEGLGAYRCSLTFDPRTANEHLSLSHEN
RRAEHLTSGPRPVPTHEARFDHTWQVLCFQGFKKGQHYWELEVSKPWAYLGVTYETIPRK
EKGKRCMVGMNELSWSLQLDEHQLSAWHNGRRETLVGPSHHSRIGMLLDYEAGTLTYYGD
GQTRLHAFHCAFTQELFPACWIGEGVSITLCSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggactctcagaattcatatctcaactgcgccatatgcctggagcgtttcagctacccc
gtgaccatcccctgcggccacaccttctgcaaagactgcatcagcacacactgggacacc
agcagcaagtctaacaaaagcccccattgccccttctgcaatcaggagttcgcgtccaga
ccggttctgaagcgaaacgtgtcgctgtcggtgttggccgagtctgccaacagcaccggc
ccatcctgcagggagcctctgctgaggtcaggggacggggcgaggactttgctgctctgc
gatcgccacaagaagcccctggtttattactgcaggcaggacaaaatgcccgtgtgctgc
gaatgtggcatcactgaatgtgccaatcacgacaaagtcatgctggaggcagagaaggaa
agtcaagagctgttgcttgaaagaaagagtaaggaagtggagaaacggcttgaggacaca
caaaagagtataaatgatttggtggagaacatcagtcatgctaaggtgactctagagcag
acttcgtcttggatgagggccaagttctcgtctctgatcaagattctgacggagaagcag
gaggccacggagctgttcatcgagcagcagaagcaggaggccatcacggaggcgcagacg
cgactggcctgcctccagcagcgcttgcagatcctccaagtgagccaagcccaaatagca
gctctgcacgatctctcagacgccgacctcattagggagtcgacgcgggtggaagtgcca
cgtttcagcgacgttcccacagaggtgtcgccaagccttctggatcgcctgaatggcgtc
acagacgttctgacccgagtctccaagctggtttctgaggacctggagagagccgtgtgc
accacggtgcttcaggacaacgacgggtctcctcaggataagaggccagtacttgctgtg
gttcccagtccggccactccgtgcctccctggtgggaaggaaggcctcggtgcctatcgg
tgctctctgacgtttgaccctcgaacggccaacgaacacctgtctctgtctcatgagaat
cggagggcggagcacctgacgtccggaccgcgcccggtcccaactcacgaggctcgcttc
gaccatacctggcaggtgctctgcttccagggctttaaaaagggacaacactactgggag
ctggaagtgtccaagccttgggcctacctcggggtaacttatgaaaccatccccaggaag
gagaaggggaagcggtgcatggtgggtatgaatgaactgtcgtggagcctccagctggac
gagcaccagctctccgcctggcacaacggccggcgggagacgctggtcggcccctcccat
cacagccgcatcggcatgctgctggactacgaggcggggacgctcacctactacggcgac
gggcagacgaggctccacgccttccactgtgccttcacccaggagctgttccccgcctgc
tggataggggagggagtcagcatcactctctgctccccgtga
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integrated database retrieval system
